Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AC109446.1-201ENST00000566172 220 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 MIR4425-201ENST00000580572 84 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AC138305.3-201ENST00000624988 240 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 AL136964.1-201ENST00000622038 2990 ntBASIC4.14□□□□□ -1.75
CHAMP1Q96JM3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.193-201ENST00000363979 102 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 U8.11-201ENST00000384699 133 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 U8.12-201ENST00000384701 133 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 RNVU1-14-201ENST00000384770 164 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 SNORA48.2-201ENST00000390926 124 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 U3.26-201ENST00000391236 204 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AL096701.2-201ENST00000416920 238 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 BX276092.3-201ENST00000424182 230 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 RPL27AP8-201ENST00000424277 446 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 MTCYBP10-201ENST00000424905 650 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 BX679664.1-201ENST00000434429 253 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 USP9YP7-201ENST00000436723 430 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 NDUFB1P2-201ENST00000449477 176 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 USP9YP32-201ENST00000452432 430 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 snoU13.4-201ENST00000458916 104 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 U8.18-201ENST00000459285 133 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC008571.1-201ENST00000467232 300 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC068781.1-201ENST00000488231 618 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AL160314.1-201ENST00000490836 438 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC018437.1-201ENST00000492214 406 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 RNU4-77P-201ENST00000516692 156 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 RNU6-307P-201ENST00000516743 106 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC008269.2-201ENST00000561915 1105 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC113195.1-201ENST00000579952 141 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 MIR3149-201ENST00000584629 83 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC006006.1-201ENST00000603082 144 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC092447.9-201ENST00000603395 144 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 SNORD58B-201ENST00000607313 66 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 U3.45-201ENST00000607547 219 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AP000553.6-201ENST00000641242 118 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AL353746.1-201ENST00000566293 6881 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 AC005592.1-201ENST00000566527 1640 ntBASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.13□□□□□ -1.75
CHAMP1Q96JM3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.455-201ENST00000384230 98 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.485-201ENST00000384395 102 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 RNU6-325P-201ENST00000411132 105 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC114482.1-201ENST00000418010 247 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 RPS15AP6-201ENST00000420703 385 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AL591419.1-201ENST00000427423 339 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 HMGB3P30-201ENST00000457863 606 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 RPS4XP2-201ENST00000458402 793 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC078817.1-201ENST00000492623 435 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC015911.1-201ENST00000495111 156 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 RNU1-95P-201ENST00000516357 160 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 RNU1-128P-201ENST00000516704 160 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 VN1R107P-201ENST00000601784 209 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 U4.6-201ENST00000621618 127 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 Z69720.2-201ENST00000624755 279 ntBASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CHAMP1Q96JM3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 MIR412-201ENST00000362142 91 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 Y_RNA.47-201ENST00000362697 108 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 SNORD14B-201ENST00000364533 90 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 RNU6-26P-201ENST00000383985 107 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 MIR183-201ENST00000384958 110 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 SNORA3.3-201ENST00000408712 125 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 RNU2-33P-201ENST00000410344 192 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 DAP3P1-201ENST00000441522 278 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 CYCSP35-201ENST00000451978 304 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 U8.20-201ENST00000459445 131 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 AC022447.4-201ENST00000504053 364 ntBASIC4.11□□□□□ -1.75
CHAMP1Q96JM3 Vault.1-201ENST00000516474 102 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms