Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ARPC3P5-201ENST00000448802 534 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 MTND1P16-201ENST00000465177 898 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SPG11Q96JI7 SNORA31.18-201ENST00000517043 134 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 AC136628.3-201ENST00000521868 290 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 AC021171.1-201ENST00000603137 706 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.14□□□□□ -2.39
SPG11Q96JI7 Y_RNA.67-201ENST00000362870 100 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 MIR506-201ENST00000384998 124 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.14□□□□□ -2.39
SPG11Q96JI7 PIGFP2-201ENST00000421400 651 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 snoU13.4-201ENST00000458916 104 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 SCARNA3-201ENST00000517097 143 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.14□□□□□ -2.39
SPG11Q96JI7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.14□□□□□ -2.39
SPG11Q96JI7 AC092354.1-201ENST00000606057 376 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 AL021879.1-201ENST00000611756 288 ntBASIC0.14□□□□□ -2.39
SPG11Q96JI7 RNU6-271P-201ENST00000363858 105 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 Y_RNA.228-201ENST00000364346 98 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 RNU11-3P-201ENST00000391111 133 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 AC009310.1-201ENST00000414414 451 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 HMGB1P36-201ENST00000487709 576 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 MIR4661-201ENST00000582720 75 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 MIR5093-201ENST00000583199 100 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 AP000238.1-201ENST00000608759 426 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 AC091925.2-201ENST00000625059 256 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 AC010329.5-201ENST00000623497 2174 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 RNU6-302P-201ENST00000365249 107 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 AL355615.1-201ENST00000406187 641 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 RNU6-575P-201ENST00000411326 105 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 MTND4LP11-201ENST00000422184 280 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 OR52A4P-202ENST00000481634 799 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 RPL21P47-201ENST00000483696 477 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 AC090142.3-201ENST00000519012 385 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 CYP3A52P-201ENST00000563326 91 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 MIR4764-201ENST00000580680 88 ntBASIC0.13□□□□□ -2.39
SPG11Q96JI7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.13□□□□□ -2.39
SPG11Q96JI7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 Y_RNA.551-201ENST00000384661 102 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 SNORA40.19-201ENST00000390846 128 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 RPL21P111-201ENST00000418453 477 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC006548.1-201ENST00000427470 102 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AL034418.1-201ENST00000448675 860 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC093913.1-201ENST00000614178 329 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 CR381572.1-201ENST00000625098 102 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 FARSBP1-201ENST00000435808 1778 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 Y_RNA.493-201ENST00000384422 102 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 MIR605-201ENST00000385078 83 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 RNA5SP212-201ENST00000391223 107 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SPG11Q96JI7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SPG11Q96JI7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 EIF4EP2-201ENST00000422816 654 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AL365496.1-201ENST00000426885 215 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 RPL36AP53-201ENST00000432891 316 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC099513.1-201ENST00000490423 301 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.12□□□□□ -2.39
SPG11Q96JI7 AP003122.4-201ENST00000530980 758 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AL391834.1-201ENST00000609609 560 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC025588.4-201ENST00000615802 908 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AC073349.3-201ENST00000617616 186 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 AL391597.1-201ENST00000618707 694 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 MIR371B-201ENST00000638082 66 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 TPTE2P4-201ENST00000258589 1605 ntBASIC0.12□□□□□ -2.39
SPG11Q96JI7 MT-TP-201ENST00000387461 68 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 BPY2DP-201ENST00000422208 265 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 MTCO2P20-201ENST00000437339 673 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.11□□□□□ -2.39
SPG11Q96JI7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.11□□□□□ -2.39
SPG11Q96JI7 AC002350.1-201ENST00000490759 375 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
SPG11Q96JI7 PSMC1P5-201ENST00000512850 177 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 AC016065.2-201ENST00000514530 444 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 SNORA4.4-201ENST00000515921 135 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 AL136520.1-202ENST00000555494 763 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 MIR4422-201ENST00000581938 83 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 MIR548Y-201ENST00000582739 110 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 RNU4-5P-201ENST00000607255 135 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 AL590410.1-201ENST00000617925 333 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.11□□□□□ -2.39
SPG11Q96JI7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms