Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 BX510359.1-201ENST00000456973 237 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 SNORD105B-201ENST00000458770 79 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 RPL21P8-201ENST00000465083 535 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 SNORA40.14-201ENST00000516543 86 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC008011.1-201ENST00000545989 227 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 MIR3941-201ENST00000582572 103 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 MIR5195-201ENST00000583555 115 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC127459.3-201ENST00000624328 466 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 MIR3651-201ENST00000630427 90 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 AL365440.1-201ENST00000436135 2167 ntBASIC3.77□□□□□ -1.81
CHFRQ96EP1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHFRQ96EP1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHFRQ96EP1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CHFRQ96EP1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CHFRQ96EP1 AC130650.2-201ENST00000618736 2403 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHFRQ96EP1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 Y_RNA.19-201ENST00000362462 99 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNU6-212P-201ENST00000362642 104 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 SNORD27-201ENST00000363981 72 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNU6-280P-201ENST00000364145 104 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 Y_RNA.314-201ENST00000365114 102 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNA5SP240-201ENST00000365355 128 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 Y_RNA.464-201ENST00000384282 110 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 SNORD70.1-201ENST00000391007 85 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 SAR1AP2-201ENST00000392696 594 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 RPLP0P7-201ENST00000416050 667 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 TOMM22P1-201ENST00000418578 312 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 FCF1P4-201ENST00000448326 183 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 AC104073.1-201ENST00000451988 151 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RPS27AP1-201ENST00000475545 471 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNU1-61P-201ENST00000516107 151 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNU5B-3P-201ENST00000516601 115 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 MIR2114-201ENST00000516645 80 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 Y_RNA.703-201ENST00000516846 111 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNU6-685P-201ENST00000517088 95 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 AC090517.1-201ENST00000569307 266 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 AC008521.1-201ENST00000587471 187 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 AC012443.1-201ENST00000605605 231 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHFRQ96EP1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHFRQ96EP1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
CHFRQ96EP1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CHFRQ96EP1 AL136164.4-201ENST00000625013 2135 ntBASIC3.76□□□□□ -1.81
CHFRQ96EP1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHFRQ96EP1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHFRQ96EP1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHFRQ96EP1 Y_RNA.105-201ENST00000363182 111 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNA5SP50-201ENST00000363731 107 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNY3P11-201ENST00000364153 102 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNU4-42P-201ENST00000364738 142 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 Y_RNA.399-201ENST00000383955 105 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 Y_RNA.506-201ENST00000384494 102 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 Y_RNA.551-201ENST00000384661 102 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNU6-278P-201ENST00000390945 109 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNA5SP424-201ENST00000390988 115 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL158156.1-201ENST00000422509 473 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC087650.1-201ENST00000431445 468 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL133396.1-201ENST00000432048 687 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL139109.1-201ENST00000455491 297 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC093852.1-201ENST00000503587 266 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC108078.2-201ENST00000510750 236 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNU6-1212P-201ENST00000517023 104 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 SNORA31.20-201ENST00000517111 133 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 RNU6-64P-201ENST00000517119 105 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL133153.1-201ENST00000557756 303 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 SNORD84-203ENST00000584275 78 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 MIR4293-201ENST00000584305 78 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC005899.2-201ENST00000584353 90 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC011471.1-201ENST00000585766 187 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC025588.3-201ENST00000604182 274 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AL160281.1-201ENST00000605307 311 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CHFRQ96EP1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 U6.104-201ENST00000637979 90 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms