Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 RPL23AP42-201ENST00000471152 471 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AC116337.1-201ENST00000509680 687 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 RNU6-677P-201ENST00000516914 101 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AL157871.3-201ENST00000557231 293 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AC233702.2-202ENST00000562547 291 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AC107952.2-201ENST00000606048 486 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 MIR6715A-201ENST00000615929 79 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 AL078595.3-201ENST00000623815 1166 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 OR4G3P-201ENST00000633500 913 ntBASIC1.84□□□□□ -2.11
ECHDC3Q96DC8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ECHDC3Q96DC8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
ECHDC3Q96DC8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RNA5SP240-201ENST00000365355 128 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RNU6-946P-201ENST00000383878 107 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 SNORD115.1-201ENST00000391109 76 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 SNORA40.18-201ENST00000391200 128 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AL008987.1-201ENST00000415528 237 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RPL23AP39-201ENST00000415533 405 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RPL22P18-201ENST00000417197 377 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RPL37P21-201ENST00000435890 276 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AL161788.1-201ENST00000441805 169 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 FDX1P2-201ENST00000450769 375 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 MTND1P12-201ENST00000455231 147 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 BTF3P15-201ENST00000455606 336 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AL139824.2-201ENST00000458731 1095 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC112771.1-201ENST00000463581 102 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC018868.1-201ENST00000491307 315 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 RNA5SP137-201ENST00000516833 135 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 SCARNA1-201ENST00000517138 166 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AP003122.4-201ENST00000530980 758 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC090888.2-201ENST00000559765 1144 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 TMF1P1-201ENST00000576058 373 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AL031281.1-201ENST00000604049 488 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC105148.1-201ENST00000604961 409 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC130324.3-201ENST00000614165 542 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC091953.2-201ENST00000623979 160 ntBASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.83□□□□□ -2.12
ECHDC3Q96DC8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC002543.1-201ENST00000299783 1954 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 Y_RNA.18-201ENST00000362461 102 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 RNY4P16-201ENST00000364768 94 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 FTH1P15-201ENST00000406984 280 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 RNU6-1025P-201ENST00000410629 104 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC092809.3-201ENST00000415453 231 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 RPS27AP14-201ENST00000422868 454 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 XKRYP1-201ENST00000423438 492 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 XKRYP2-201ENST00000432915 492 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AL008629.1-201ENST00000438615 184 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 DNAJC19P4-201ENST00000440115 345 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 CYP2C59P-201ENST00000457790 269 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC034244.1-201ENST00000507687 207 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 RNU2-10P-201ENST00000516375 211 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 SNORA48.11-201ENST00000517015 89 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC022616.6-201ENST00000520479 119 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC007375.1-201ENST00000554513 578 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC136619.2-201ENST00000563361 631 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC011494.1-201ENST00000596454 237 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AL022154.1-201ENST00000604698 785 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 AC087045.1-201ENST00000605856 382 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 MIR15A-201ENST00000607334 83 ntBASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ECHDC3Q96DC8 Y_RNA.33-201ENST00000362591 102 ntBASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 RNU6-660P-201ENST00000364566 109 ntBASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 MIR1302-8-201ENST00000408342 128 ntBASIC1.81□□□□□ -2.12
ECHDC3Q96DC8 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms