Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 RNU6-1137P-201ENST00000517073 99 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 AC023632.4-201ENST00000517783 191 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 DNAJC8P1-201ENST00000554535 372 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.96□□□□□ -1.78
ERCC4Q92889 MIR1254-2-201ENST00000579553 63 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 AC008737.2-201ENST00000599446 118 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 NUTF2P8-201ENST00000604593 363 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 AC008121.3-201ENST00000618726 433 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERCC4Q92889 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ERCC4Q92889 AL359693.1-201ENST00000614959 2407 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ERCC4Q92889 AC058791.1-201ENST00000608412 3198 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ERCC4Q92889 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ERCC4Q92889 MIR412-201ENST00000362142 91 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RNA5SP295-201ENST00000362655 121 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 Y_RNA.245-201ENST00000364493 95 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RNU6-842P-201ENST00000384269 107 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RNU6-1025P-201ENST00000410629 104 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.95□□□□□ -1.78
ERCC4Q92889 AC113618.1-201ENST00000416747 285 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 USMG5P1-201ENST00000425964 177 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 TRIAP1P1-201ENST00000427062 225 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.95□□□□□ -1.78
ERCC4Q92889 RPS3AP46-201ENST00000448352 682 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RN7SL542P-201ENST00000467147 294 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RPL21P13-201ENST00000488305 481 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.95□□□□□ -1.78
ERCC4Q92889 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.95□□□□□ -1.78
ERCC4Q92889 HMGN1P11-201ENST00000508668 303 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.95□□□□□ -1.78
ERCC4Q92889 RNU6-1046P-201ENST00000516538 107 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RNU6-579P-201ENST00000516879 102 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 RNU1-45P-201ENST00000517191 141 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.95□□□□□ -1.78
ERCC4Q92889 OR1M4P-201ENST00000589199 287 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 AC123912.5-201ENST00000605470 343 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ERCC4Q92889 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ERCC4Q92889 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.95□□□□□ -1.78
ERCC4Q92889 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ERCC4Q92889 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.95□□□□□ -1.78
ERCC4Q92889 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC4Q92889 AL049641.1-201ENST00000441055 1948 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 RNU1-75P-201ENST00000347264 129 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 Y_RNA.133-201ENST00000363428 110 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 Y_RNA.151-201ENST00000363566 112 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 RNU6-596P-201ENST00000365395 98 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 MIR517A-201ENST00000385001 87 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 SYF2P2-201ENST00000417620 583 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 AC243428.1-201ENST00000421099 264 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 AL358176.2-201ENST00000425769 204 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC4Q92889 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC4Q92889 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.94□□□□□ -1.78
ERCC4Q92889 AC010401.1-201ENST00000463867 348 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.94□□□□□ -1.78
ERCC4Q92889 RNU6-470P-201ENST00000515954 104 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 RNA5SP384-201ENST00000516615 116 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.94□□□□□ -1.78
ERCC4Q92889 SYF2P1-201ENST00000550658 413 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC4Q92889 TRAV28-201ENST00000557548 323 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 AC011890.2-201ENST00000613393 294 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.94□□□□□ -1.78
ERCC4Q92889 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ERCC4Q92889 AC008568.2-201ENST00000623862 2313 ntBASIC3.94□□□□□ -1.78
ERCC4Q92889 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ERCC4Q92889 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ERCC4Q92889 RNU6-490P-201ENST00000362985 107 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 Y_RNA.158-201ENST00000363651 101 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 RNU6-1059P-201ENST00000363752 98 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 SNORD14B-201ENST00000364533 90 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 Y_RNA.496-201ENST00000384444 101 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 SNORA41-201ENST00000384675 132 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ERCC4Q92889 AL030996.1-201ENST00000411430 235 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.93□□□□□ -1.78
ERCC4Q92889 AL096701.2-201ENST00000416920 238 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AC097713.2-201ENST00000430199 356 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 BX679664.1-201ENST00000434429 253 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.93□□□□□ -1.78
ERCC4Q92889 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.93□□□□□ -1.78
ERCC4Q92889 FTH1P25-201ENST00000447665 469 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 MTND5P22-201ENST00000458380 195 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 SNORA84-201ENST00000459229 133 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AL135752.1-201ENST00000479477 471 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.93□□□□□ -1.78
ERCC4Q92889 RPL21P129-201ENST00000491732 478 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.93□□□□□ -1.78
ERCC4Q92889 RNA5SP290-201ENST00000517133 127 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AC104576.1-201ENST00000524225 88 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.93□□□□□ -1.78
ERCC4Q92889 AL160281.1-201ENST00000605307 311 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AC083806.3-201ENST00000614016 455 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 AL513302.2-201ENST00000562313 1842 ntBASIC3.93□□□□□ -1.78
ERCC4Q92889 MTND5P16-201ENST00000460269 1703 ntBASIC3.92□□□□□ -1.78
ERCC4Q92889 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms