Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL365496.1-201ENST00000426885 215 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC098614.3-201ENST00000438957 440 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 RPL7P12-201ENST00000446719 750 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 HMGN2P10-201ENST00000448085 265 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC233279.1-201ENST00000455300 423 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 CENPBD1P1-201ENST00000464061 469 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 HMGN1P12-201ENST00000499125 195 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC069113.1-201ENST00000517763 267 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC087241.2-201ENST00000535801 324 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 APOOP1-201ENST00000604695 592 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.2□□□□□ -1.9
HMGB4Q8WW32 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGB4Q8WW32 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 RNU6-510P-201ENST00000391239 108 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 Y_RNA.604-201ENST00000410574 102 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC016831.2-201ENST00000417179 352 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 IFNA20P-201ENST00000436840 528 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 MTND5P20-201ENST00000448677 143 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 RN7SL330P-201ENST00000469709 307 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 TRBVA-201ENST00000498804 316 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC046134.1-201ENST00000514454 666 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 RN7SKP256-201ENST00000517201 314 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC021739.1-201ENST00000559631 174 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC004852.3-201ENST00000614131 326 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 AC093913.1-201ENST00000614178 329 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 FAM157A-202ENST00000615155 405 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 Z69720.2-201ENST00000624755 279 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 CDC27P3-201ENST00000635418 1910 ntBASIC3.19□□□□□ -1.9
HMGB4Q8WW32 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGB4Q8WW32 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RNU6-845P-201ENST00000362578 103 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RNU6-72P-201ENST00000384285 79 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RPS15AP5-201ENST00000436276 388 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC107083.1-201ENST00000439643 279 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 BTF3P15-201ENST00000455606 336 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RPS4XP2-201ENST00000458402 793 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RNU4-49P-201ENST00000516080 140 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RN7SKP272-201ENST00000516988 232 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 MIR5047-201ENST00000579212 100 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 NUTF2P8-201ENST00000604593 363 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AL357078.3-201ENST00000607528 618 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AL008636.1-201ENST00000625038 1018 ntBASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HMGB4Q8WW32 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGB4Q8WW32 RNU6-1252P-201ENST00000363054 104 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
HMGB4Q8WW32 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms