Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR3167-201ENST00000579623 85 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 PIGPP4-201ENST00000584447 307 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 MTND4LP5-201ENST00000605152 292 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC004223.4-201ENST00000612426 332 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC104010.1-201ENST00000616889 150 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AL603758.1-201ENST00000618654 241 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC027309.3-201ENST00000623419 351 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 AC135776.4-201ENST00000624300 1904 ntBASIC1.68□□□□□ -2.14
SHROOM3Q8TF72 Y_RNA.46-201ENST00000362695 102 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNY1-201ENST00000364228 113 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SNORD114-22-201ENST00000365423 72 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 MIR558-201ENST00000384920 94 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 MIR1-2-201ENST00000384961 85 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SNORD97-201ENST00000459187 142 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC008526.1-201ENST00000509149 338 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 Y_RNA.695-201ENST00000516715 107 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNU6-1282P-201ENST00000516735 96 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNA5SP471-201ENST00000516971 106 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNA5SP290-201ENST00000517133 127 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC040904.1-201ENST00000590850 223 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC073648.5-201ENST00000603502 305 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 uc_338.5-201ENST00000611839 155 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AL359740.1-201ENST00000624340 592 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC138915.1-201ENST00000565427 1685 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-9-201ENST00000384000 95 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-3-201ENST00000384287 95 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-7-201ENST00000384404 95 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-5-201ENST00000384462 95 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNA5SP252-201ENST00000391131 119 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 Y_RNA.598-201ENST00000410480 95 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNU2-66P-201ENST00000410650 161 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 RNU6-516P-201ENST00000411381 104 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AL365338.1-201ENST00000422282 858 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC007919.1-201ENST00000429380 217 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC009296.1-201ENST00000443146 155 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 ARL2BPP4-201ENST00000506854 471 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 NDUFB4P2-201ENST00000509515 391 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AP003122.4-201ENST00000530980 758 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC006362.1-201ENST00000567392 174 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 MIR548AB-201ENST00000584917 84 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 GLUD1P4-201ENST00000590914 418 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AL022161.1-201ENST00000604390 213 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC022709.1-201ENST00000615967 87 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 DUXAP9-208ENST00000622815 614 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 AC090582.1-201ENST00000636321 199 ntBASIC1.67□□□□□ -2.14
SHROOM3Q8TF72 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 RNU6-1284P-201ENST00000363701 100 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 RNU6-769P-201ENST00000384407 104 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 SNORA1.3-201ENST00000384676 136 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AL031577.2-201ENST00000404133 280 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 RN7SKP142-201ENST00000411236 328 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 ELOCP17-201ENST00000414751 326 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 SNRPEP4-201ENST00000435815 279 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AC020550.1-201ENST00000447385 163 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AC108059.3-201ENST00000456388 214 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AL031183.1-201ENST00000457667 207 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 RNA5SP310-201ENST00000459084 116 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 RNU6-1003P-201ENST00000517099 105 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AC106038.2-201ENST00000520706 568 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AL078603.1-201ENST00000603824 313 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 AC009878.1-201ENST00000621819 340 ntBASIC1.66□□□□□ -2.14
SHROOM3Q8TF72 TEX21P-201ENST00000447107 1476 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms