Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL23AP30-201ENST00000432419 501 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RPL36AP53-201ENST00000432891 316 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 GPR143P-201ENST00000434155 205 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC018634.1-201ENST00000437554 401 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RPS15AP9-201ENST00000439856 381 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 HMGN2P23-201ENST00000456759 269 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RPL21P99-201ENST00000480369 423 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC103851.1-201ENST00000506833 274 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 SNORA40.12-201ENST00000516329 111 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 RNU6-1220P-201ENST00000517126 108 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AP003497.1-201ENST00000528472 562 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 OR5B19P-201ENST00000531766 928 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL356432.3-201ENST00000568952 465 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC005668.1-201ENST00000571142 476 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 MIR5092-201ENST00000583139 88 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL353997.4-201ENST00000586196 166 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC098848.2-201ENST00000588023 330 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AP000942.4-201ENST00000604811 241 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL162730.1-201ENST00000605734 292 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AC009248.2-201ENST00000619826 254 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 TPTEP1-208ENST00000636884 213 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNED1Q8TER0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.94□□□□□ -1.94
SNED1Q8TER0 CUL1P1-201ENST00000509510 2425 ntBASIC2.94□□□□□ -1.94
SNED1Q8TER0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNED1Q8TER0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 RNU6-173P-201ENST00000364215 104 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RNY4P16-201ENST00000364768 94 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 TXNP7-201ENST00000406296 293 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL353729.1-201ENST00000425044 720 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 IFNA20P-201ENST00000436840 528 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RNU7-63P-201ENST00000459054 62 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RPL23AP11-201ENST00000475260 469 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC010265.1-201ENST00000513509 211 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RNU6-327P-201ENST00000516270 127 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC090572.1-201ENST00000519251 160 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 BTF3P12-201ENST00000519620 469 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL133255.1-201ENST00000606374 441 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 SNORA50A-202ENST00000629536 136 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 CYP3A51P-201ENST00000633513 256 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNED1Q8TER0 MAPK10-322ENST00000641485 4530 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 MTND4P35-201ENST00000604257 1375 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC092447.10-201ENST00000620607 1652 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 Y_RNA.384-201ENST00000383909 102 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RN7SKP140-201ENST00000411196 284 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC009161.1-201ENST00000417306 376 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 MTCO3P46-201ENST00000425787 232 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC137499.1-201ENST00000427602 88 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL049734.2-201ENST00000441066 616 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 MTCYBP6-201ENST00000441810 138 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC006512.1-201ENST00000468816 291 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RPS27AP9-201ENST00000477681 438 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC132942.1-201ENST00000486753 483 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC092185.1-201ENST00000491371 97 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RNU6-277P-201ENST00000516272 106 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 RNU6-1045P-201ENST00000516321 107 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC107953.1-201ENST00000522216 297 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 TRAV37-201ENST00000553906 342 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC026464.5-201ENST00000562497 722 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AP001330.4-201ENST00000604350 154 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC113139.1-201ENST00000605049 239 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC008962.1-201ENST00000605729 304 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 uc_338.5-201ENST00000611839 155 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC004696.1-201ENST00000614345 607 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL603758.1-201ENST00000618654 241 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AL356585.4-201ENST00000623078 1229 ntBASIC2.93□□□□□ -1.94
SNED1Q8TER0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.93□□□□□ -1.94
SNED1Q8TER0 MTND4P27-201ENST00000450813 1354 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms