Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.308-201ENST00000365043 101 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.353-201ENST00000365440 108 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-76P-201ENST00000384060 104 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-1289P-201ENST00000384431 106 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-658P-201ENST00000384606 106 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 CYCSP19-201ENST00000411715 316 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RPS20P1-201ENST00000434853 354 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 TOMM22P6-201ENST00000465035 409 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 AC108022.1-201ENST00000493466 478 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RNA5SP154-201ENST00000516193 111 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-927P-201ENST00000516199 100 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RNU1-45P-201ENST00000517191 141 ntBASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.36□□□□□ -1.71
SHKBP1Q8TBC3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-222P-201ENST00000362438 107 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.33-201ENST00000362591 102 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-227P-201ENST00000362865 103 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.123-201ENST00000363338 102 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-263P-201ENST00000363811 107 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.400-201ENST00000383963 111 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-44P-201ENST00000384045 107 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-926P-201ENST00000384075 107 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 Y_RNA.488-201ENST00000384403 102 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 MIR554-201ENST00000384874 96 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 MIR301A-201ENST00000385261 86 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AP001025.1-201ENST00000486139 332 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RPL30P1-201ENST00000488676 339 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AC091959.1-201ENST00000495857 238 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AK3P2-201ENST00000507976 429 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 SNORA67.7-201ENST00000516664 135 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 RNA5SP471-201ENST00000516971 106 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 HMGB1P14-201ENST00000557424 591 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 MIR4423-201ENST00000580922 80 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AC060766.3-201ENST00000591442 263 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AC005046.1-201ENST00000608515 625 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AC006133.1-201ENST00000617106 264 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 AC073349.3-201ENST00000617616 186 ntBASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHKBP1Q8TBC3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 RNA5SP205-201ENST00000364653 136 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 RNA5SP22-201ENST00000365393 109 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 RNU6-318P-201ENST00000384283 103 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 LAP3P1-201ENST00000403648 294 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AL035461.1-201ENST00000421490 332 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AL358472.1-201ENST00000431295 329 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 Z82188.1-201ENST00000436709 154 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC146944.2-203ENST00000502493 354 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC139495.1-202ENST00000513164 354 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 SNORA27.4-201ENST00000516650 95 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 IFITM8P-201ENST00000522529 394 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 MIR3158-1-201ENST00000583596 81 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AL161629.2-201ENST00000615347 275 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AC084757.4-201ENST00000616350 526 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AL138721.1-201ENST00000616756 179 ntBASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHKBP1Q8TBC3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHKBP1Q8TBC3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SHKBP1Q8TBC3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.34□□□□□ -1.72
SHKBP1Q8TBC3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
SHKBP1Q8TBC3 MIR412-201ENST00000362142 91 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms