Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC022493.1-201ENST00000492984 337 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 RPS27AP10-201ENST00000496103 208 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.26□□□□□ -1.89
USP38Q8NB14 AC112206.3-201ENST00000514578 389 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 SCGB1D5P-201ENST00000515134 247 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 MTND1P35-201ENST00000526739 508 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.26□□□□□ -1.89
USP38Q8NB14 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.26□□□□□ -1.89
USP38Q8NB14 AC079600.2-201ENST00000550076 130 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AL162413.1-201ENST00000603198 110 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AC025754.2-201ENST00000606491 432 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
USP38Q8NB14 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP38Q8NB14 U8.2-201ENST00000363156 134 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 MIR196B-201ENST00000384852 84 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 RPS4XP7-201ENST00000406274 780 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 NDUFS5P4-201ENST00000412983 318 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.25□□□□□ -1.89
USP38Q8NB14 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.25□□□□□ -1.89
USP38Q8NB14 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.25□□□□□ -1.89
USP38Q8NB14 RPS3AP44-201ENST00000425466 790 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AC098614.2-201ENST00000426040 255 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 GTF2IP20-201ENST00000431663 360 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.25□□□□□ -1.89
USP38Q8NB14 AL513328.1-201ENST00000446460 224 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.25□□□□□ -1.89
USP38Q8NB14 SCARNA18-201ENST00000459004 134 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AL121769.1-201ENST00000469473 401 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 RN7SL20P-201ENST00000488827 297 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.25□□□□□ -1.89
USP38Q8NB14 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.25□□□□□ -1.89
USP38Q8NB14 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.25□□□□□ -1.89
USP38Q8NB14 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.25□□□□□ -1.89
USP38Q8NB14 AC234778.2-201ENST00000566241 354 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 MIR5583-1-201ENST00000580941 59 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 BNIP3P30-201ENST00000601184 574 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AC007938.3-201ENST00000604965 623 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 YWHAEP7-203ENST00000622054 312 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AC064859.1-201ENST00000624741 174 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.25□□□□□ -1.89
USP38Q8NB14 U2.21-201ENST00000637295 81 ntBASIC3.25□□□□□ -1.89
USP38Q8NB14 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP38Q8NB14 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP38Q8NB14 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP38Q8NB14 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.24□□□□□ -1.89
USP38Q8NB14 ADAM3A-203ENST00000461344 2157 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SNORD3E-201ENST00000362899 217 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SNORA9.2-201ENST00000365361 133 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP38Q8NB14 Y_RNA.450-201ENST00000384198 113 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 Y_RNA.453-201ENST00000384223 109 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 MIR767-201ENST00000390228 109 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SNORD70.1-201ENST00000391007 85 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 RNA5SP354-201ENST00000391247 136 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 BTF3P7-201ENST00000407097 488 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
USP38Q8NB14 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.24□□□□□ -1.89
USP38Q8NB14 UBE2V1P8-201ENST00000437166 265 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SEPT14P3-201ENST00000439401 183 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.24□□□□□ -1.89
USP38Q8NB14 AL078601.1-201ENST00000444542 271 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.24□□□□□ -1.89
USP38Q8NB14 AL732372.2-207ENST00000445840 183 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SEPT14P2-201ENST00000453405 183 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.24□□□□□ -1.89
USP38Q8NB14 SNORD109B-201ENST00000458961 67 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SNORD109A-201ENST00000459128 67 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 SEPT14P4-201ENST00000513445 186 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 FO082796.1-201ENST00000523795 183 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AC109635.3-201ENST00000529536 185 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 NACAP3-201ENST00000552100 481 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.24□□□□□ -1.89
USP38Q8NB14 MIR4506-201ENST00000584693 77 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AC107304.1-201ENST00000604229 296 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.24□□□□□ -1.89
USP38Q8NB14 U6atac.1-201ENST00000616025 117 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 uc_338.34-201ENST00000617467 174 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 MIR1321-201ENST00000637766 79 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.24□□□□□ -1.89
USP38Q8NB14 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
USP38Q8NB14 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP38Q8NB14 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP38Q8NB14 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP38Q8NB14 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.23□□□□□ -1.89
USP38Q8NB14 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.23□□□□□ -1.89
USP38Q8NB14 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU6-799P-201ENST00000363567 107 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU6-371P-201ENST00000364283 108 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU4-66P-201ENST00000365199 138 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.23□□□□□ -1.89
USP38Q8NB14 SNORA75B-201ENST00000384053 137 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU6-45P-201ENST00000384471 107 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNA5SP274-201ENST00000410484 108 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU2-49P-201ENST00000410666 184 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms