Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PRPF38AQ8NAV1 MAPK10-362ENST00000641864 4484 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-128P-201ENST00000383976 107 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 MIR518D-201ENST00000385014 87 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-1106P-201ENST00000390845 107 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 SNORA48.8-201ENST00000391324 134 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 SAR1AP2-201ENST00000392696 594 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 MIR450B-201ENST00000401182 78 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 RNA5SP293-201ENST00000410527 113 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AL096701.2-201ENST00000416920 238 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 IFNA20P-201ENST00000436840 528 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 MTND5P20-201ENST00000448677 143 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC125238.1-201ENST00000448842 249 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC010265.1-201ENST00000513509 211 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 SNORD19.2-201ENST00000516978 73 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC109479.2-201ENST00000517842 174 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC243972.3-201ENST00000539655 198 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC005476.1-201ENST00000554427 397 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 MIR5692C1-201ENST00000585309 91 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC005498.1-201ENST00000592125 465 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC008121.1-201ENST00000603244 268 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 APOOP1-201ENST00000604695 592 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 AC022306.2-201ENST00000617563 647 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 Z69720.2-201ENST00000624755 279 ntBASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.85□□□□□ -1.79
PRPF38AQ8NAV1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-254P-201ENST00000363377 107 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-214P-201ENST00000384130 107 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RN7SKP32-201ENST00000410167 303 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-55P-201ENST00000411092 107 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-954P-201ENST00000411355 107 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AC233279.1-201ENST00000455300 423 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RPS29P12-201ENST00000460178 152 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RPS27P29-201ENST00000463110 252 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RPL23AP67-201ENST00000465341 474 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AC117503.1-201ENST00000472241 394 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 CTHRC1P1-201ENST00000605383 469 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 RNU6-85P-201ENST00000605989 107 ntBASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRPF38AQ8NAV1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
PRPF38AQ8NAV1 AC004944.1-201ENST00000517807 3059 ntBASIC3.84□□□□□ -1.8
PRPF38AQ8NAV1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRPF38AQ8NAV1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC093908.1-201ENST00000623125 8092 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 RNU6-845P-201ENST00000362578 103 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 Y_RNA.166-201ENST00000363730 102 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 MIR128-1-201ENST00000384921 82 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 SNORA48.5-201ENST00000391143 135 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC096664.2-201ENST00000411843 406 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC016831.2-201ENST00000417179 352 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AL365400.1-201ENST00000431854 640 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AL359672.1-201ENST00000442302 409 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 RNU7-66P-201ENST00000459469 62 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC087884.1-201ENST00000469738 328 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 RN7SL442P-201ENST00000473804 320 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 Y_RNA.702-201ENST00000516843 96 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC107953.1-201ENST00000522216 297 ntBASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.83□□□□□ -1.8
PRPF38AQ8NAV1 AL121821.2-201ENST00000556081 394 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms