Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 WASF1P1-201ENST00000447560 1131 ntBASIC2.39□□□□□ -2.03
CCDC71Q8IV32 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 AC128713.1-201ENST00000471495 306 ntBASIC2.39□□□□□ -2.03
CCDC71Q8IV32 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 AC024940.5-201ENST00000622889 474 ntBASIC2.39□□□□□ -2.03
CCDC71Q8IV32 AC139792.2-201ENST00000624218 587 ntBASIC2.39□□□□□ -2.03
CCDC71Q8IV32 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 OR5AK4P-201ENST00000635912 903 ntBASIC2.39□□□□□ -2.03
CCDC71Q8IV32 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC71Q8IV32 AC135776.4-201ENST00000624300 1904 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RNU1-100P-201ENST00000365255 165 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 U8.8-201ENST00000365399 135 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 MIR627-201ENST00000384979 97 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 SNORA40C-201ENST00000391285 128 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RNA5SP111-201ENST00000411386 101 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 GTF2IP20-201ENST00000431663 360 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RPS15AP5-201ENST00000436276 388 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC011816.1-201ENST00000441346 546 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RPS3P1-201ENST00000456781 192 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 GMFBP1-201ENST00000467831 427 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RPL9P6-201ENST00000492764 598 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RPS27P26-201ENST00000494583 239 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 EIF4EP3-201ENST00000498782 656 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC025755.1-201ENST00000521306 278 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC027176.1-201ENST00000560204 514 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC025281.1-201ENST00000567026 265 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC012507.3-201ENST00000603556 477 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AL670379.4-201ENST00000605279 254 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC013562.2-201ENST00000611632 603 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC104237.2-201ENST00000612456 443 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AC124864.2-201ENST00000624736 186 ntBASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC71Q8IV32 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNU6-371P-201ENST00000364283 108 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNU6-1029P-201ENST00000384109 107 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNU6-658P-201ENST00000384606 106 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNU2-9P-201ENST00000410194 145 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 OR6C66P-201ENST00000414917 930 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC009414.1-201ENST00000427200 443 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AL596276.1-201ENST00000434465 418 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 CR769767.1-201ENST00000436337 346 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 MTND1P1-201ENST00000445453 368 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC104058.1-201ENST00000448028 297 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 HMGN2P10-201ENST00000448085 265 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 MTND1P18-201ENST00000448191 573 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC006512.1-201ENST00000468816 291 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC022493.1-201ENST00000492984 337 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNU6-572P-201ENST00000516724 80 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNA5SP503-201ENST00000517047 117 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNU6-1183P-201ENST00000517054 60 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 CKS1BP7-201ENST00000522230 235 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC245505.1-201ENST00000556398 224 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC021739.1-201ENST00000559631 174 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AL138889.2-201ENST00000603883 242 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AL158209.2-201ENST00000619266 216 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AL359740.1-201ENST00000624340 592 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 U6.99-201ENST00000637524 83 ntBASIC2.37□□□□□ -2.03
CCDC71Q8IV32 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71Q8IV32 HSPA8P4-201ENST00000511877 1920 ntBASIC2.36□□□□□ -2.03
CCDC71Q8IV32 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC71Q8IV32 CKAP2P1-201ENST00000555477 2049 ntBASIC2.36□□□□□ -2.03
CCDC71Q8IV32 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC71Q8IV32 AL139276.1-201ENST00000311910 1001 ntBASIC2.36□□□□□ -2.03
CCDC71Q8IV32 RNU6-1287P-201ENST00000362914 107 ntBASIC2.36□□□□□ -2.03
CCDC71Q8IV32 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
CCDC71Q8IV32 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC71Q8IV32 RNU6-1060P-201ENST00000384664 107 ntBASIC2.36□□□□□ -2.03
CCDC71Q8IV32 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms