Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 RNU1-86P-201ENST00000516108 154 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 RNU1-107P-201ENST00000516617 154 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.74□□□□□ -1.97
LDB1Q86U70 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 GLYCAM1-201ENST00000546596 285 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 LRRC37A5P-203ENST00000580181 585 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 AC025165.5-201ENST00000602802 578 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 U4.5-201ENST00000617137 123 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.74□□□□□ -1.97
LDB1Q86U70 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.74□□□□□ -1.97
LDB1Q86U70 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
LDB1Q86U70 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB1Q86U70 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LDB1Q86U70 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB1Q86U70 RNU1-100P-201ENST00000365255 165 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 Y_RNA.372-201ENST00000365599 102 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 RNU6-72P-201ENST00000384285 79 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 MIR23A-201ENST00000385245 73 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 SNORD37.1-201ENST00000390968 65 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 RNU6-780P-201ENST00000391030 104 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AL606923.1-201ENST00000406616 190 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 RNU2-3P-201ENST00000410144 191 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.73□□□□□ -1.97
LDB1Q86U70 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB1Q86U70 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB1Q86U70 AC112220.1-201ENST00000434628 355 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB1Q86U70 AC009296.1-201ENST00000443146 155 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB1Q86U70 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB1Q86U70 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB1Q86U70 GZMAP1-201ENST00000503054 631 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 RNU2-69P-201ENST00000516061 100 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 RNU6-835P-201ENST00000516974 104 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 MTND4P7-201ENST00000523876 130 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 BNIP3P6-201ENST00000549284 499 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB1Q86U70 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB1Q86U70 TPRKBP2-201ENST00000565969 475 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB1Q86U70 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB1Q86U70 uc_338.34-201ENST00000617467 174 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AL031601.2-202ENST00000622650 282 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AC022418.1-201ENST00000624118 445 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 AC138915.1-201ENST00000565427 1685 ntBASIC2.73□□□□□ -1.97
LDB1Q86U70 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LDB1Q86U70 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.72□□□□□ -1.97
LDB1Q86U70 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LDB1Q86U70 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LDB1Q86U70 SNORA16.2-201ENST00000390991 127 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 RNU6-192P-201ENST00000391253 100 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AL139281.1-201ENST00000422120 335 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 PRPS1P1-201ENST00000445305 876 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 MRPL50P4-201ENST00000446432 475 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 snoU109.2-201ENST00000459316 135 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AC090525.1-201ENST00000479116 478 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 MTAPP1-201ENST00000489154 819 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AC079140.5-201ENST00000507882 310 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AC098799.2-201ENST00000509466 868 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB1Q86U70 RNA5SP401-201ENST00000515920 127 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 RNU5F-8P-201ENST00000515941 111 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 RNU6-1281P-201ENST00000516223 105 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 RNA5SP76-201ENST00000516277 87 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 SCARNA11.3-201ENST00000517276 130 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB1Q86U70 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AL157687.1-201ENST00000554853 619 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 MIR3605-201ENST00000583214 100 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB1Q86U70 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB1Q86U70 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LDB1Q86U70 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB1Q86U70 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
LDB1Q86U70 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LDB1Q86U70 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
LDB1Q86U70 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LDB1Q86U70 AC004520.1-201ENST00000608362 1413 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB1Q86U70 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 Y_RNA.6-201ENST00000362350 114 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 SNORA68.1-201ENST00000364537 132 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB1Q86U70 Y_RNA.399-201ENST00000383955 105 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms