Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 RNU6-942P-201ENST00000363002 107 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 RNU6-1020P-201ENST00000363684 107 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 RNU6-682P-201ENST00000363843 106 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 Y_RNA.230-201ENST00000364348 109 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 RNU6-217P-201ENST00000384164 104 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 UBA52P6-201ENST00000399822 382 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 PPIAP31-201ENST00000405422 495 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 MTHFD2P2-201ENST00000407725 247 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 SNORD12B-201ENST00000410433 91 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AL160275.2-201ENST00000412010 394 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC016769.2-201ENST00000414815 475 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC243964.1-201ENST00000441814 261 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 TMSB4XP3-201ENST00000445144 114 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 HMGN2P21-201ENST00000447764 270 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 NUTF2P7-201ENST00000453086 375 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AP000870.1-201ENST00000472927 406 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 RN7SL691P-201ENST00000494487 301 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC107393.1-201ENST00000512403 346 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC006064.5-201ENST00000541782 248 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AL138963.2-201ENST00000605137 226 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 MIR7154-201ENST00000620673 73 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC112200.1-201ENST00000625015 234 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 AC140479.6-201ENST00000633535 357 ntBASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.09□□□□□ -1.75
UBE3DQ7Z6J8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.09□□□□□ -1.76
UBE3DQ7Z6J8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3DQ7Z6J8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
UBE3DQ7Z6J8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 A2MP1-204ENST00000566278 4130 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 SNORA25.1-201ENST00000362326 128 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.82-201ENST00000363000 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.92-201ENST00000363043 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.235-201ENST00000364412 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.306-201ENST00000365015 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.312-201ENST00000365089 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.322-201ENST00000365151 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Z98749.2-208ENST00000381646 500 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-514P-201ENST00000384208 107 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-125P-201ENST00000384505 107 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-541P-201ENST00000384709 110 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-21P-201ENST00000384710 107 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.569-201ENST00000384749 103 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RNA5SP44-201ENST00000410446 133 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RN7SKP216-201ENST00000411050 312 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 DNAJC19P7-201ENST00000428811 344 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AC007395.1-201ENST00000451333 677 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.650-201ENST00000459002 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AC011276.1-201ENST00000469688 323 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AF186996.7-201ENST00000492781 209 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.683-201ENST00000516508 93 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.777-201ENST00000516982 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 RNU6-1073P-201ENST00000517182 106 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 IGKV2-38-201ENST00000517443 247 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 MIR4282-201ENST00000583613 67 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.771-201ENST00000598668 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AC010620.2-201ENST00000600135 313 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AL590392.1-201ENST00000604960 446 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 FTX_3.1-201ENST00000610451 147 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 AL133243.3-201ENST00000617415 3004 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 Y_RNA.789-201ENST00000622480 102 ntBASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE3DQ7Z6J8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 AC027290.2-201ENST00000623210 18662 ntBASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
UBE3DQ7Z6J8 UBE2WP1-201ENST00000362030 340 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms