Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL589823.1-201ENST00000429577 183 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AL358934.1-201ENST00000432346 324 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 NEFMP1-201ENST00000443423 1006 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 MTCYBP1-201ENST00000454315 1119 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AC013267.1-201ENST00000458227 267 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RPL21P39-201ENST00000463605 483 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RPL21P93-201ENST00000480465 489 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AC093591.1-201ENST00000491435 481 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RPL21P16-201ENST00000495531 483 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 SCARNA24.1-201ENST00000516465 137 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 RNU6-1092P-201ENST00000516955 87 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AC024909.2-201ENST00000553035 286 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 MIR98-201ENST00000606724 119 ntBASIC2.79□□□□□ -1.96
NPHP3Q7Z494 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP3Q7Z494 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 RNU6-288P-201ENST00000363690 104 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 Y_RNA.194-201ENST00000363985 102 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 RNU6-282P-201ENST00000365357 103 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 U3.37-201ENST00000408528 213 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC114491.1-201ENST00000416095 246 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC098614.2-201ENST00000426040 255 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 Z82205.1-201ENST00000428456 297 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 RPS15AP5-201ENST00000436276 388 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC079448.1-201ENST00000449377 373 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 SNORA31.3-201ENST00000516029 96 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 RNU7-51P-201ENST00000516560 62 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 RNU6-430P-201ENST00000517078 107 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC087883.1-201ENST00000551882 391 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.78□□□□□ -1.96
NPHP3Q7Z494 MTCYBP33-201ENST00000575007 1130 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC103810.1-201ENST00000579873 453 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 VN1R80P-201ENST00000597126 338 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC004805.2-201ENST00000605382 482 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AP002360.4-201ENST00000606980 481 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AL589743.7-201ENST00000612637 233 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 AC091834.1-201ENST00000614543 472 ntBASIC2.78□□□□□ -1.96
NPHP3Q7Z494 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
NPHP3Q7Z494 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 HSPE1P11-201ENST00000339579 310 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.22-201ENST00000362492 102 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 RNY1P12-201ENST00000364251 105 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 RNU6-512P-201ENST00000364438 103 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 MIR627-201ENST00000384979 97 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 RNU2-49P-201ENST00000410666 184 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 ZNF90P2-204ENST00000419323 1075 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 RPL23AP30-201ENST00000432419 501 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 SNRPEP9-201ENST00000436794 238 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 RPL37P6-201ENST00000460682 294 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC113155.1-201ENST00000511141 769 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 MTND3P5-201ENST00000512798 333 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 GLYCAM1-201ENST00000546596 285 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC078814.3-201ENST00000553036 491 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.6-201ENST00000603753 252 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.11-201ENST00000604059 253 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC008162.1-201ENST00000604718 254 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.1-201ENST00000604752 252 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.5-201ENST00000605253 252 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.12-201ENST00000605291 253 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.8-201ENST00000605353 252 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL670379.7-201ENST00000605823 252 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 AC034102.8-201ENST00000615146 484 ntBASIC2.77□□□□□ -1.97
NPHP3Q7Z494 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.77□□□□□ -1.97
NPHP3Q7Z494 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 UBE2L2-201ENST00000254302 429 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 MIR337-201ENST00000362281 93 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 RNU6-1167P-201ENST00000363227 94 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 RNU6-960P-201ENST00000364056 120 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 RNU6-946P-201ENST00000383878 107 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.559-201ENST00000384686 107 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 HMGN2P35-201ENST00000412164 270 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms