Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC092953.2-201ENST00000608000 699 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 MIR8065-201ENST00000620577 100 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC090772.4-201ENST00000623599 362 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC100821.1-201ENST00000523153 2479 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 Y_RNA.390-201ENST00000383932 102 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 Y_RNA.518-201ENST00000384552 113 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.37□□□□□ -2.35
UBR3Q6ZT12 RNU6-1256P-201ENST00000516539 103 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AC080013.4-201ENST00000607624 649 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 AL359314.1-201ENST00000616913 261 ntBASIC0.37□□□□□ -2.35
UBR3Q6ZT12 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
UBR3Q6ZT12 SNORA4.1-201ENST00000364263 144 ntBASIC0.36□□□□□ -2.35
UBR3Q6ZT12 RNU6-35P-201ENST00000384530 107 ntBASIC0.36□□□□□ -2.35
UBR3Q6ZT12 MIR29C-201ENST00000385231 88 ntBASIC0.36□□□□□ -2.35
UBR3Q6ZT12 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR3Q6ZT12 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR3Q6ZT12 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR3Q6ZT12 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.36□□□□□ -2.35
UBR3Q6ZT12 RPS26P55-201ENST00000471178 356 ntBASIC0.36□□□□□ -2.35
UBR3Q6ZT12 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.36□□□□□ -2.35
UBR3Q6ZT12 OR5T3-201ENST00000303059 1023 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 MIR32-201ENST00000384965 70 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 RNU2-36P-201ENST00000410361 191 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC013267.1-201ENST00000458227 267 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC104629.2-201ENST00000468627 598 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 VPS26AP1-201ENST00000483197 979 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC010409.1-201ENST00000487382 476 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC022616.2-201ENST00000523185 300 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC124293.1-201ENST00000530034 493 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 VN1R82P-201ENST00000601481 356 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 SNRPGP17-201ENST00000603780 214 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC004492.1-201ENST00000607036 742 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 MTCO1P23-201ENST00000415223 1526 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 MTCO3P5-201ENST00000433620 714 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 LARP1BP2-201ENST00000486594 519 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 SNORA31.17-201ENST00000516953 127 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 FAM60CP-201ENST00000591086 664 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC126177.8-201ENST00000618339 1015 ntBASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.35□□□□□ -2.35
UBR3Q6ZT12 AL591034.2-201ENST00000402839 359 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 RNU2-64P-201ENST00000411315 191 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 BPY2DP-201ENST00000422208 265 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 COPS8P3-201ENST00000526024 482 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.34□□□□□ -2.36
UBR3Q6ZT12 AC125611.1-201ENST00000549563 229 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 AC015688.2-201ENST00000584523 262 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 MTCO2P2-201ENST00000591258 225 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 AC022387.2-201ENST00000604050 448 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 U1.36-201ENST00000620684 176 ntBASIC0.34□□□□□ -2.36
UBR3Q6ZT12 SNORA25-201ENST00000384384 134 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 MIR1290-201ENST00000408735 78 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 MIR1912-201ENST00000410389 80 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 USP9YP26-201ENST00000421008 661 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC097463.2-201ENST00000421074 142 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 USP9YP18-201ENST00000425912 695 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 USP9YP17-201ENST00000444617 696 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC145146.1-201ENST00000496370 254 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 SMURF2P1-201ENST00000514992 481 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC023050.2-201ENST00000544968 387 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC021739.1-201ENST00000559631 174 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AL713866.2-201ENST00000603579 219 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AL021879.1-201ENST00000611756 288 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 MIR6130-201ENST00000619419 109 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AL139098.1-201ENST00000407291 389 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 NCOR1P3-201ENST00000420479 303 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 PGBD4P5-201ENST00000445958 426 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC124947.2-202ENST00000552735 133 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AL161729.4-201ENST00000604650 476 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 AC073968.1-201ENST00000618594 637 ntBASIC0.33□□□□□ -2.36
UBR3Q6ZT12 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 MIR888-201ENST00000401186 77 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 RNA5SP501-201ENST00000410990 112 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 BTF3P8-201ENST00000414577 526 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 AC010099.3-201ENST00000423896 409 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 AL512637.2-201ENST00000431287 1256 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 Z82210.1-201ENST00000440037 231 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.32□□□□□ -2.36
UBR3Q6ZT12 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
UBR3Q6ZT12 HMGN1P10-201ENST00000474557 553 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 BOLA3P3-201ENST00000505182 232 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms