Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC245102.2-201ENST00000448956 180 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 PRELID3BP1-201ENST00000457142 540 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 SNORD116-28-201ENST00000516123 91 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 MIR4422-201ENST00000581938 83 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC073544.2-201ENST00000601155 540 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC079791.1-201ENST00000605356 973 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC110792.4-201ENST00000609843 298 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AL391597.1-201ENST00000618707 694 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC005832.2-201ENST00000538921 1430 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 MIR26B-201ENST00000362251 77 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 RNU6-26P-201ENST00000383985 107 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 HMGB1P17-201ENST00000403495 628 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AL117342.1-201ENST00000404861 406 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 MIR1303-201ENST00000408625 86 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC013267.1-201ENST00000458227 267 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 Y_RNA.654-201ENST00000497848 106 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC016252.1-201ENST00000609721 474 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AL355472.4-201ENST00000610233 626 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 MIR8074-201ENST00000615081 81 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 U4atac.1-201ENST00000618345 95 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 AC091925.2-201ENST00000625059 256 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 Z99571.1-201ENST00000636677 394 ntBASIC0.31□□□□□ -2.36
CSPG4Q6UVK1 RNU6-270P-201ENST00000364131 105 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 MIR32-201ENST00000384965 70 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 MTCO1P56-201ENST00000401674 224 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC098831.1-201ENST00000440661 216 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC005741.1-201ENST00000511094 432 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AL049870.4-201ENST00000555741 486 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC022202.1-201ENST00000613515 211 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AL357075.2-201ENST00000614906 189 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC013470.4-201ENST00000619978 986 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 SNORA4.1-201ENST00000364263 144 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 RNU4-67P-201ENST00000364569 141 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 RNU6-167P-201ENST00000384292 106 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 SNORA51.10-201ENST00000384418 136 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 MED14P1-201ENST00000430517 648 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC011406.1-201ENST00000512440 370 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC093677.1-201ENST00000514414 678 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 RNA5SP67-201ENST00000516422 131 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 DEFB108D-201ENST00000527787 222 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC006518.2-201ENST00000542513 940 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 BNIP3P16-201ENST00000589779 534 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AL669831.4-202ENST00000590817 238 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC011374.2-201ENST00000607135 526 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 AC073308.1-201ENST00000623696 305 ntBASIC0.3□□□□□ -2.36
CSPG4Q6UVK1 RNU6-251P-201ENST00000363235 104 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 Y_RNA.255-201ENST00000364581 97 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 RNU6-339P-201ENST00000384310 107 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 Y_RNA.552-201ENST00000384665 112 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AL031577.2-201ENST00000404133 280 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 RNU2-49P-201ENST00000410666 184 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 BPY2DP-201ENST00000422208 265 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC010099.3-201ENST00000423896 409 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC092573.2-201ENST00000434546 243 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC087477.1-201ENST00000465747 340 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC025459.1-201ENST00000504072 156 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC118282.2-201ENST00000508739 374 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 RNA5SP112-201ENST00000515937 99 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 RNU7-40P-201ENST00000516397 64 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC012669.1-201ENST00000603209 283 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AL121890.5-201ENST00000620848 304 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AL512506.2-201ENST00000624472 458 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AC099654.5-201ENST00000636479 350 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 AL159152.1-201ENST00000635019 2587 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 Y_RNA.67-201ENST00000362870 100 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 RNU6-1035P-201ENST00000384477 107 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 MIR506-201ENST00000384998 124 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 RNA5SP212-201ENST00000391223 107 ntBASIC0.29□□□□□ -2.36
CSPG4Q6UVK1 MIR1283-2-201ENST00000408621 87 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms