Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AC068790.2-201ENST00000602601 557 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AL670379.10-201ENST00000604330 253 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AL670379.9-201ENST00000605428 253 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AC005332.10-201ENST00000612725 619 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AC009509.4-201ENST00000619202 509 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AC092656.1-203ENST00000624134 423 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 AC138627.2-201ENST00000624202 601 ntBASIC2.52□□□□□ -2.01
CASC4Q6P4E1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CASC4Q6P4E1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CASC4Q6P4E1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 Y_RNA.359-201ENST00000365498 102 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 SNORD116-2-201ENST00000384274 95 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RNU6-72P-201ENST00000384285 79 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 SNORD116-1-201ENST00000384335 95 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 SNORD116-6-201ENST00000384711 96 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 U3.37-201ENST00000408528 213 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 NUP35P1-201ENST00000422734 947 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 MTCO2P11-201ENST00000431069 680 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AC132479.1-201ENST00000449160 144 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AL441985.1-201ENST00000457727 251 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RPS29P15-201ENST00000458329 171 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RNU7-182P-201ENST00000459009 62 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RPL23AP45-201ENST00000476406 468 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 SNORA25.11-201ENST00000515935 105 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RNU1-86P-201ENST00000516108 154 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RNU1-107P-201ENST00000516617 154 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AC010186.2-204ENST00000537668 439 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 SUB1P2-201ENST00000556401 297 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AL391840.1-201ENST00000571144 367 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 RN7SKP299-201ENST00000606679 301 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AC009161.2-201ENST00000624626 138 ntBASIC2.51□□□□□ -2.01
CASC4Q6P4E1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CASC4Q6P4E1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNU6-1287P-201ENST00000362914 107 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNU6-942P-201ENST00000363002 107 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 U8.8-201ENST00000365399 135 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNU4-48P-201ENST00000365559 182 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNU6-1060P-201ENST00000384664 107 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 MIR34A-201ENST00000385130 110 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 BX276092.3-201ENST00000424182 230 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNU7-26P-201ENST00000458980 63 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC096576.1-201ENST00000489014 359 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNA5SP503-201ENST00000517047 117 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AP002963.1-201ENST00000530590 184 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC023824.2-201ENST00000566185 400 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC073539.2-201ENST00000597113 165 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC091834.1-201ENST00000614543 472 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 HMGB1P24-202ENST00000615653 685 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 SEPT14P19-203ENST00000633205 211 ntBASIC2.5□□□□□ -2.01
CASC4Q6P4E1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CASC4Q6P4E1 RNU6-486P-201ENST00000363116 107 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 MIR196B-201ENST00000384852 84 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 CDK8P2-201ENST00000415020 547 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.49□□□□□ -2.01
CASC4Q6P4E1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.49□□□□□ -2.01
CASC4Q6P4E1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.49□□□□□ -2.01
CASC4Q6P4E1 CALM1P1-201ENST00000442082 433 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.49□□□□□ -2.01
CASC4Q6P4E1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 AC022364.2-201ENST00000457963 554 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 RPL36AP48-201ENST00000485521 314 ntBASIC2.49□□□□□ -2.01
CASC4Q6P4E1 MTND3P25-201ENST00000509243 135 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms