Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
ZNF544Q6NX49 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
ZNF544Q6NX49 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ZNF544Q6NX49 AC010680.1-201ENST00000590024 3590 ntBASIC2.23□□□□□ -2.05
ZNF544Q6NX49 RNU6-1167P-201ENST00000363227 94 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 RNU6-641P-201ENST00000384006 107 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 RNU6-217P-201ENST00000384164 104 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 Y_RNA.534-201ENST00000384599 112 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 SNORA41-201ENST00000384675 132 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 MIR27B-201ENST00000385129 97 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 CIR1P3-201ENST00000405137 479 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 Y_RNA.619-201ENST00000410951 90 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 RNU6-193P-201ENST00000410977 107 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC114491.1-201ENST00000416095 246 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 C8orf59P1-201ENST00000429930 303 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 MTND1P4-201ENST00000435196 415 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC009296.1-201ENST00000443146 155 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 FABP5P15-201ENST00000453566 214 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 GMFBP1-201ENST00000467831 427 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 RPL39P36-201ENST00000490784 156 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 RNU6-677P-201ENST00000516914 101 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 RNA5SP291-201ENST00000517222 105 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC104383.1-201ENST00000530297 370 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC027807.1-201ENST00000559921 996 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 MIR4658-201ENST00000584344 65 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC012507.3-201ENST00000603556 477 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AF250324.2-201ENST00000608299 610 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AL161629.2-201ENST00000615347 275 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 uc_338.11-201ENST00000619132 160 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AL589994.2-201ENST00000621124 579 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AL157786.1-207ENST00000627771 695 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.22□□□□□ -2.05
ZNF544Q6NX49 AC243829.7-201ENST00000633081 225 ntBASIC2.22□□□□□ -2.05
ZNF544Q6NX49 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 RNU6-179P-201ENST00000363350 107 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 RNA5SP126-201ENST00000365092 109 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 SNORD115-7-201ENST00000365306 82 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 RNU6-517P-201ENST00000384362 110 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 Y_RNA.481-201ENST00000384373 102 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 RPS12P24-201ENST00000412619 387 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 MTCYBP5-201ENST00000423752 1135 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 ELOCP14-201ENST00000428070 331 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 HMGB1P27-201ENST00000431429 603 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AL591704.1-201ENST00000432574 275 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AL512844.2-201ENST00000433990 593 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 ELOCP7-201ENST00000439968 331 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 DPPA3P1-201ENST00000448050 469 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC093899.1-201ENST00000457984 376 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC083798.1-201ENST00000472671 131 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 MRPL42P6-201ENST00000486397 371 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC009646.1-201ENST00000510455 318 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC108078.2-201ENST00000510750 236 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC105417.1-201ENST00000514691 285 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 Y_RNA.693-201ENST00000516641 110 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC243972.3-201ENST00000539655 198 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 HMGB1P33-201ENST00000563485 527 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC098826.3-201ENST00000603823 466 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 Z84480.1-201ENST00000605131 311 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC012409.4-201ENST00000612923 249 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC090517.2-201ENST00000614966 680 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC025034.2-201ENST00000623264 286 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC139792.3-201ENST00000623525 224 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 SEPT14P19-203ENST00000633205 211 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC068137.3-201ENST00000639191 341 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 AC073869.6-201ENST00000640656 341 ntBASIC2.21□□□□□ -2.06
ZNF544Q6NX49 CKAP2P1-201ENST00000555477 2049 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 UBE2L2-201ENST00000254302 429 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 RNU6-1322P-201ENST00000364309 107 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 RNU6-190P-201ENST00000384154 102 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 SNORA51.11-201ENST00000384442 131 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 RNU6-1158P-201ENST00000391167 107 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 FCF1P9-201ENST00000412546 282 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.2□□□□□ -2.06
ZNF544Q6NX49 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF544Q6NX49 USP9YP18-201ENST00000425912 695 ntBASIC2.2□□□□□ -2.06
ZNF544Q6NX49 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms