Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 Y_RNA.414-201ENST00000384011 101 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 SNORA16.2-201ENST00000390991 127 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU2-49P-201ENST00000410666 184 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC063979.1-201ENST00000415539 377 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 USP9YP20-201ENST00000419224 558 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AL358075.3-201ENST00000426289 226 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC009414.1-201ENST00000427200 443 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AL591704.1-201ENST00000432574 275 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 UBBP3-201ENST00000445497 241 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 PPP1R2P5-201ENST00000457256 603 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU7-66P-201ENST00000459469 62 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU6-914P-201ENST00000516749 109 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 MIR4795-201ENST00000584182 89 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 Z82243.1-201ENST00000609432 473 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC073476.4-201ENST00000628409 72 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 AC121333.1-201ENST00000567488 2709 ntBASIC3.72□□□□□ -1.81
LONRF3Q496Y0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LONRF3Q496Y0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LONRF3Q496Y0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 SNORD56.5-201ENST00000364281 72 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 RNU6-393P-201ENST00000384475 107 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 RPL26P27-201ENST00000414397 437 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 BX682237.1-201ENST00000415016 335 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 RPS15AP6-201ENST00000420703 385 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 RPL7P37-201ENST00000425095 738 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AL669831.1-202ENST00000428504 417 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 GTF2IP13-201ENST00000438487 386 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 RN7SL504P-201ENST00000494496 287 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 RNU6-189P-201ENST00000516120 101 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC022634.1-201ENST00000520765 532 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AP000763.2-201ENST00000540641 163 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 NACAP3-201ENST00000552100 481 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AC025281.1-201ENST00000567026 265 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 MIR4276-201ENST00000584832 70 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 AL356055.1-201ENST00000602528 446 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 SNORD39.4-201ENST00000620099 78 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 MIR3199-2-201ENST00000636243 86 ntBASIC3.71□□□□□ -1.82
LONRF3Q496Y0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.71□□□□□ -1.82
LONRF3Q496Y0 ADAM3A-203ENST00000461344 2157 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 RNA5SP219-201ENST00000390940 113 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 RNA5SP229-201ENST00000410809 99 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 RPL7P10-201ENST00000417407 739 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 SKA2P1-201ENST00000425592 390 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 CST9LP2-201ENST00000437612 320 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 HMGB1P18-201ENST00000438801 619 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 RPL21P13-201ENST00000488305 481 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 RPS27AP10-201ENST00000496103 208 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC093027.1-201ENST00000546698 429 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC103705.1-201ENST00000619013 241 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.7□□□□□ -1.82
LONRF3Q496Y0 AL133216.2-202ENST00000634512 349 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
LONRF3Q496Y0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms