Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AL441985.1-201ENST00000457727 251 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AC008549.1-201ENST00000512900 643 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 SCARNA13-201ENST00000516672 275 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 SNORA70.18-201ENST00000516696 98 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 RAB11AP2-201ENST00000545905 639 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 CR383656.8-201ENST00000549046 145 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 MIR4425-201ENST00000580572 84 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 ELOCP5-201ENST00000604924 333 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AL132765.2-201ENST00000610812 351 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AL355365.1-201ENST00000616480 294 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 AC103988.1-201ENST00000566382 2177 ntBASIC4.12□□□□□ -1.75
CCDC144BQ3MJ40 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 MAPK10-322ENST00000641485 4530 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-942P-201ENST00000363002 107 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AP002088.1-201ENST00000382740 395 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-750P-201ENST00000390946 107 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 Z92545.1-201ENST00000411782 234 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC012308.1-201ENST00000451232 178 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC013470.1-201ENST00000453438 462 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RBMY2UP-201ENST00000453474 324 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 Y_RNA.635-201ENST00000459041 101 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RN7SL601P-201ENST00000471221 293 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RPS27P27-201ENST00000498779 255 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-581P-201ENST00000516214 105 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AP005639.2-201ENST00000527592 928 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC011471.1-201ENST00000585766 187 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AL117336.2-201ENST00000602435 335 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 AC010378.1-201ENST00000619270 362 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 CEP170P1-201ENST00000502249 4587 ntBASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC144BQ3MJ40 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC091564.4-201ENST00000533934 2194 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RNU1-33P-201ENST00000364249 162 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RNA5SP42-201ENST00000364278 115 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RNU6-593P-201ENST00000364716 112 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 Y_RNA.339-201ENST00000365325 102 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 Y_RNA.384-201ENST00000383909 102 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 Y_RNA.529-201ENST00000384586 119 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 SNORD73A-201ENST00000386062 65 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RPL37P10-201ENST00000412884 288 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AL117339.3-201ENST00000418733 162 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RPL7P37-201ENST00000425095 738 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RPL21P10-201ENST00000463521 490 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RPL23AP49-201ENST00000492925 468 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 MTND5P5-201ENST00000503764 376 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 RN7SKP57-201ENST00000517248 293 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC104576.1-201ENST00000524225 88 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC020895.1-201ENST00000595362 272 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 VN1R107P-201ENST00000601784 209 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC006077.1-201ENST00000604746 343 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC113139.1-201ENST00000605049 239 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC011890.2-201ENST00000613393 294 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 MIR3529-201ENST00000637713 78 ntBASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC144BQ3MJ40 AC010889.1-201ENST00000566193 2666 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 AC007496.3-201ENST00000624987 3443 ntBASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC144BQ3MJ40 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms