Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 KATNBL1P3-201ENST00000443475 909 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.27□□□□□ -2.37
HMGN3Q15651 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.27□□□□□ -2.37
HMGN3Q15651 PTP4A1P4-201ENST00000512479 322 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.27□□□□□ -2.37
HMGN3Q15651 AC090142.3-201ENST00000519012 385 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.27□□□□□ -2.37
HMGN3Q15651 ZNF705CP-201ENST00000530515 889 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.27□□□□□ -2.37
HMGN3Q15651 AC087897.1-201ENST00000550134 156 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.27□□□□□ -2.37
HMGN3Q15651 SUMO2P14-201ENST00000604488 293 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
HMGN3Q15651 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
HMGN3Q15651 AC023934.1-201ENST00000574529 2389 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGN3Q15651 RNU6-1065P-201ENST00000384513 106 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.26□□□□□ -2.37
HMGN3Q15651 PTGES3P1-201ENST00000439531 483 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGN3Q15651 HMGN2P9-201ENST00000476875 229 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGN3Q15651 AC074344.1-201ENST00000512823 224 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AC103833.1-201ENST00000517442 172 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AC022616.8-201ENST00000533569 253 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AL512310.8-201ENST00000550183 120 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AC004217.3-201ENST00000551552 878 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AL132857.1-201ENST00000555180 708 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AL137100.2-201ENST00000555786 315 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AL121821.2-201ENST00000556081 394 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.26□□□□□ -2.37
HMGN3Q15651 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.26□□□□□ -2.37
HMGN3Q15651 AC011374.2-201ENST00000607135 526 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 AC243829.3-201ENST00000622177 108 ntBASIC0.26□□□□□ -2.37
HMGN3Q15651 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.26□□□□□ -2.37
HMGN3Q15651 U3.8-201ENST00000363675 217 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 RNU6-152P-201ENST00000384037 107 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 MIR1302-8-201ENST00000408342 128 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 RNU2-48P-201ENST00000410694 191 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.25□□□□□ -2.37
HMGN3Q15651 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 TAF9P1-201ENST00000445421 515 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 OR2AQ1P-201ENST00000451972 200 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 TAF9P2-201ENST00000454958 515 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC013267.1-201ENST00000458227 267 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 SNORD124-201ENST00000459577 104 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC011005.2-201ENST00000487324 359 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 COX6CP6-201ENST00000490840 228 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC067942.3-201ENST00000512025 362 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 RN7SKP88-201ENST00000516847 250 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.25□□□□□ -2.37
HMGN3Q15651 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.25□□□□□ -2.37
HMGN3Q15651 AP000763.2-201ENST00000540641 163 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC006518.2-201ENST00000542513 940 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 PSMA3P-201ENST00000555485 635 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.25□□□□□ -2.37
HMGN3Q15651 AC096772.1-201ENST00000609146 564 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 Z82243.1-201ENST00000609432 473 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 7SK.8-201ENST00000612110 250 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC024257.5-201ENST00000612739 531 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 AC107075.1-201ENST00000613695 314 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.25□□□□□ -2.37
HMGN3Q15651 7SK.11-201ENST00000615477 250 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 MIR6513-201ENST00000621188 64 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 7SK.13-201ENST00000622040 250 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 MIR5087-201ENST00000635826 76 ntBASIC0.25□□□□□ -2.37
HMGN3Q15651 RNA5SP361-201ENST00000362686 118 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 RNU1-133P-201ENST00000364867 167 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.24□□□□□ -2.37
HMGN3Q15651 AC127391.1-201ENST00000411737 98 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 USP9YP19-201ENST00000412165 485 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGN3Q15651 USP9YP13-201ENST00000417797 480 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN3Q15651 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN3Q15651 RPL26P26-201ENST00000480251 434 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HMGN3Q15651 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN3Q15651 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HMGN3Q15651 RNU6-496P-201ENST00000516145 99 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN3Q15651 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HMGN3Q15651 MIR3124-201ENST00000582636 67 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGN3Q15651 CLIC4P2-201ENST00000601934 717 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGN3Q15651 AC068787.1-201ENST00000623908 691 ntBASIC0.24□□□□□ -2.37
HMGN3Q15651 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.23□□□□□ -2.37
HMGN3Q15651 RNU6-778P-201ENST00000363269 103 ntBASIC0.23□□□□□ -2.37
HMGN3Q15651 RPS3AP1-201ENST00000413190 320 ntBASIC0.23□□□□□ -2.37
HMGN3Q15651 AL161935.2-201ENST00000414627 60 ntBASIC0.23□□□□□ -2.37
HMGN3Q15651 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN3Q15651 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN3Q15651 AC010099.3-201ENST00000423896 409 ntBASIC0.23□□□□□ -2.37
HMGN3Q15651 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN3Q15651 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms