| NPRL3 | Q12980 | SCARNA4-202 | ENST00000625402 | 129 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | WARS-244 | ENST00000627608 | 123 nt | TSL 5 BASIC | 2.38 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | PRKACB-204 | ENST00000370685 | 4481 nt | APPRIS P4 TSL 1 (best) BASIC | 2.38 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RBBP8P1-201 | ENST00000449447 | 1844 nt | BASIC | 2.38 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-942P-201 | ENST00000363002 | 107 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU1-112P-201 | ENST00000364401 | 164 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | U8.8-201 | ENST00000365399 | 135 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC105271.1-202 | ENST00000411417 | 445 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RPLP0P7-201 | ENST00000416050 | 667 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC138623.1-201 | ENST00000418060 | 216 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | CALM2P2-201 | ENST00000428512 | 440 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RPL31P35-201 | ENST00000431058 | 377 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | INTS6-AS1-201 | ENST00000434512 | 466 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | CR769767.1-201 | ENST00000436337 | 346 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AL161788.1-201 | ENST00000441805 | 169 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC244505.5-201 | ENST00000443639 | 207 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | PLCXD2-AS1-201 | ENST00000493131 | 491 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNA5SP282-201 | ENST00000516355 | 108 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | Y_RNA.688-201 | ENST00000516565 | 95 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MIR5692A1-201 | ENST00000580523 | 69 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC096708.3-201 | ENST00000584226 | 559 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC104237.2-201 | ENST00000612456 | 443 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | Z69908.1-201 | ENST00000622603 | 247 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | SCARNA15.3-201 | ENST00000626315 | 122 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AL358154.1-201 | ENST00000627075 | 444 nt | TSL 3 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | SCARNA4.1-201 | ENST00000628597 | 123 nt | BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.37 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | EYS-211 | ENST00000503581 | 10589 nt | APPRIS P3 TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MAP4K3-205 | ENST00000437545 | 3924 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNA5SP21-201 | ENST00000410917 | 96 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AL592435.1-201 | ENST00000416401 | 469 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | BX295541.1-201 | ENST00000417774 | 250 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MTCYBP5-201 | ENST00000423752 | 1135 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | ARL5AP4-201 | ENST00000430731 | 512 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC092573.2-202 | ENST00000437243 | 336 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AL606534.3-201 | ENST00000437499 | 373 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | LINC02195-201 | ENST00000443373 | 294 nt | TSL 3 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC079781.2-201 | ENST00000446424 | 169 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC006026.2-201 | ENST00000457376 | 180 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | SNORD109B-201 | ENST00000458961 | 67 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | SNORD109A-201 | ENST00000459128 | 67 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNA5SP356-201 | ENST00000515972 | 94 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | Y_RNA.695-201 | ENST00000516715 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-410P-201 | ENST00000517006 | 107 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AP001646.1-201 | ENST00000527936 | 915 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | ZNF84-205 | ENST00000535439 | 647 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | CR383656.8-201 | ENST00000549046 | 145 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC013417.1-201 | ENST00000549896 | 271 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MIR4319-201 | ENST00000577285 | 85 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC087749.2-201 | ENST00000583910 | 352 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC098848.2-201 | ENST00000588023 | 330 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC110760.3-201 | ENST00000598794 | 467 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC245014.2-201 | ENST00000603689 | 287 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC246785.4-201 | ENST00000605374 | 287 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC021646.1-201 | ENST00000605469 | 484 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC087752.4-201 | ENST00000605911 | 462 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AL137847.3-201 | ENST00000611521 | 109 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | C8orf59-209 | ENST00000612977 | 586 nt | APPRIS P1 TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | HIKESHI-208 | ENST00000618164 | 499 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC093648.1-201 | ENST00000623546 | 606 nt | BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC068631.1-221 | ENST00000626006 | 592 nt | TSL 5 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | TLK1-206 | ENST00000434911 | 2156 nt | TSL 2 BASIC | 2.36 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | SAMD9L-201 | ENST00000318238 | 7134 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MTND5P17-201 | ENST00000418405 | 1603 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | ELL2P3-201 | ENST00000457883 | 1602 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | TAB3-205 | ENST00000378933 | 6671 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AMY2B-208 | ENST00000610648 | 1736 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | DEFB114-201 | ENST00000322066 | 253 nt | APPRIS P1 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-859P-201 | ENST00000362728 | 107 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | Y_RNA.201-201 | ENST00000364052 | 96 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-371P-201 | ENST00000364283 | 108 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU1-91P-201 | ENST00000364746 | 163 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU6-487P-201 | ENST00000365430 | 104 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | RNU1-57P-201 | ENST00000384491 | 166 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AL139039.1-201 | ENST00000401900 | 692 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | EEF1A1P40-201 | ENST00000412883 | 573 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC002456.1-201 | ENST00000415965 | 317 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | C1DP2-201 | ENST00000418167 | 426 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC133106.1-201 | ENST00000419029 | 397 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | TOMM20P4-201 | ENST00000427861 | 435 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC093423.2-201 | ENST00000429074 | 437 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC097662.1-205 | ENST00000433324 | 241 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC091153.2-202 | ENST00000441700 | 384 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | USP9YP29-201 | ENST00000445112 | 563 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC104663.1-201 | ENST00000508555 | 557 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC117460.1-201 | ENST00000508964 | 467 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | LINC02500-201 | ENST00000512547 | 493 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MTCO3P28-201 | ENST00000513351 | 515 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | LINC00824-201 | ENST00000517583 | 805 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | AC109329.1-201 | ENST00000518744 | 317 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | CKS1BP7-201 | ENST00000522230 | 235 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NPRL3 | Q12980 | MTND2P38-201 | ENST00000522536 | 667 nt | BASIC | 2.35 | □□□□□ -2.03 | | |