Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.55□□□□□ -2
CX3CL1P78423 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 AC093010.3-201ENST00000570269 15214 ntBASIC2.55□□□□□ -2
CX3CL1P78423 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-37P-201ENST00000362692 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-11P-201ENST00000364234 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-7-201ENST00000364784 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-8-201ENST00000365467 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.55□□□□□ -2
CX3CL1P78423 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-25P-201ENST00000383873 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-1-201ENST00000383898 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-48P-201ENST00000384161 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-36P-201ENST00000384172 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-4P-201ENST00000384205 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-5P-201ENST00000384238 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-3P-201ENST00000384314 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-16P-201ENST00000384385 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-15P-201ENST00000384534 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-2-201ENST00000384627 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-29P-201ENST00000384637 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 SNORA46-201ENST00000384762 135 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-9-201ENST00000384776 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-33P-201ENST00000384793 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MTND1P23-201ENST00000416931 372 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AL358075.3-201ENST00000426289 226 ntBASIC2.55□□□□□ -2
CX3CL1P78423 HMGB1P31-201ENST00000437242 427 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AL671855.1-201ENST00000446875 1203 ntBASIC2.55□□□□□ -2
CX3CL1P78423 UQCRHP3-201ENST00000451503 251 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AC091153.1-201ENST00000466297 402 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RN7SL601P-201ENST00000471221 293 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MRPL42P6-201ENST00000486397 371 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 AL117351.2-201ENST00000513571 157 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AC114781.4-201ENST00000513707 639 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-358P-201ENST00000516564 75 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-1069P-201ENST00000516612 133 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AC069113.1-201ENST00000517763 267 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 AC023050.3-201ENST00000541142 333 ntBASIC2.55□□□□□ -2
CX3CL1P78423 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.55□□□□□ -2
CX3CL1P78423 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.55□□□□□ -2
CX3CL1P78423 AL133241.1-201ENST00000556832 487 ntBASIC2.55□□□□□ -2
CX3CL1P78423 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.55□□□□□ -2
CX3CL1P78423 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.55□□□□□ -2
CX3CL1P78423 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.55□□□□□ -2
CX3CL1P78423 AC008121.1-201ENST00000603244 268 ntBASIC2.55□□□□□ -2
CX3CL1P78423 CTHRC1P1-201ENST00000605383 469 ntBASIC2.55□□□□□ -2
CX3CL1P78423 RNU6-6P-201ENST00000606623 107 ntBASIC2.55□□□□□ -2
CX3CL1P78423 MIR92B-201ENST00000607575 96 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AC004832.5-201ENST00000608677 401 ntBASIC2.55□□□□□ -2
CX3CL1P78423 AL121757.2-201ENST00000611223 313 ntBASIC2.55□□□□□ -2
CX3CL1P78423 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CX3CL1P78423 AC100810.6-201ENST00000638068 285 ntBASIC2.55□□□□□ -2
CX3CL1P78423 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CX3CL1P78423 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.54□□□□□ -2
CX3CL1P78423 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CX3CL1P78423 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.54□□□□□ -2
CX3CL1P78423 AP003122.5-201ENST00000527668 3766 ntBASIC2.54□□□□□ -2
CX3CL1P78423 MTND5P1-201ENST00000445440 1375 ntBASIC2.54□□□□□ -2
CX3CL1P78423 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.54□□□□□ -2
CX3CL1P78423 RNU6-78P-201ENST00000362897 107 ntBASIC2.54□□□□□ -2
CX3CL1P78423 RNA5SP267-201ENST00000364893 126 ntBASIC2.54□□□□□ -2
CX3CL1P78423 Y_RNA.373-201ENST00000365600 103 ntBASIC2.54□□□□□ -2
CX3CL1P78423 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CX3CL1P78423 RNU6-19P-201ENST00000384718 107 ntBASIC2.54□□□□□ -2
CX3CL1P78423 RNVU1-14-201ENST00000384770 164 ntBASIC2.54□□□□□ -2
CX3CL1P78423 EIF4E2P1-201ENST00000393781 255 ntBASIC2.54□□□□□ -2
CX3CL1P78423 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AL357075.1-201ENST00000404107 726 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.54□□□□□ -2
CX3CL1P78423 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.54□□□□□ -2
CX3CL1P78423 AC093151.1-201ENST00000427711 313 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AC005326.1-201ENST00000429197 123 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AC006028.1-201ENST00000438379 402 ntBASIC2.54□□□□□ -2
CX3CL1P78423 RPL23AP58-201ENST00000440453 469 ntBASIC2.54□□□□□ -2
CX3CL1P78423 RPL7P49-201ENST00000471402 708 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.54□□□□□ -2
CX3CL1P78423 AC074250.1-201ENST00000511117 192 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.54□□□□□ -2
CX3CL1P78423 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.54□□□□□ -2
CX3CL1P78423 MIR2682-201ENST00000580305 110 ntBASIC2.54□□□□□ -2
CX3CL1P78423 MIR5692C1-201ENST00000585309 91 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.54□□□□□ -2
CX3CL1P78423 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.54□□□□□ -2
CX3CL1P78423 RBM11P1-201ENST00000604951 799 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AL591516.1-201ENST00000611326 274 ntBASIC2.54□□□□□ -2
CX3CL1P78423 RMST_7.1-201ENST00000621935 268 ntBASIC2.54□□□□□ -2
CX3CL1P78423 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.54□□□□□ -2
CX3CL1P78423 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
CX3CL1P78423 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CX3CL1P78423 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.53□□□□□ -2
CX3CL1P78423 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
CX3CL1P78423 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
CX3CL1P78423 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms