Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.52□□□□□ -2.33
UBA52P62987 AL132857.1-201ENST00000555180 708 ntBASIC0.52□□□□□ -2.33
UBA52P62987 AC104229.1-201ENST00000561364 255 ntBASIC0.52□□□□□ -2.33
UBA52P62987 SNORD39.3-201ENST00000584451 71 ntBASIC0.52□□□□□ -2.33
UBA52P62987 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.52□□□□□ -2.33
UBA52P62987 AL512605.2-201ENST00000592972 256 ntBASIC0.52□□□□□ -2.33
UBA52P62987 BNIP3P23-201ENST00000599655 511 ntBASIC0.52□□□□□ -2.33
UBA52P62987 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
UBA52P62987 AL589743.1-201ENST00000551932 2712 ntBASIC0.52□□□□□ -2.33
UBA52P62987 Z75746.1-201ENST00000440243 2080 ntBASIC0.52□□□□□ -2.33
UBA52P62987 Y_RNA.30-201ENST00000362572 97 ntBASIC0.51□□□□□ -2.33
UBA52P62987 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC078974.1-201ENST00000411597 223 ntBASIC0.51□□□□□ -2.33
UBA52P62987 SKA2P1-201ENST00000425592 390 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC245102.2-201ENST00000448956 180 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.51□□□□□ -2.33
UBA52P62987 AC136628.3-201ENST00000521868 290 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.51□□□□□ -2.33
UBA52P62987 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.51□□□□□ -2.33
UBA52P62987 SUMO2P14-201ENST00000604488 293 ntBASIC0.51□□□□□ -2.33
UBA52P62987 ELOCP5-201ENST00000604924 333 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC027335.2-201ENST00000624030 375 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AP003400.6-201ENST00000624698 740 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC099654.5-201ENST00000636479 350 ntBASIC0.51□□□□□ -2.33
UBA52P62987 AC083865.1-201ENST00000636634 831 ntBASIC0.51□□□□□ -2.33
UBA52P62987 MIR924-201ENST00000638017 53 ntBASIC0.51□□□□□ -2.33
UBA52P62987 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.5□□□□□ -2.33
UBA52P62987 RNA5SP457-201ENST00000363657 124 ntBASIC0.5□□□□□ -2.33
UBA52P62987 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.5□□□□□ -2.33
UBA52P62987 SNORA48.1-201ENST00000390879 135 ntBASIC0.5□□□□□ -2.33
UBA52P62987 RNU2-33P-201ENST00000410344 192 ntBASIC0.5□□□□□ -2.33
UBA52P62987 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
UBA52P62987 USP9YP33-201ENST00000412220 421 ntBASIC0.5□□□□□ -2.33
UBA52P62987 NDUFS5P4-201ENST00000412983 318 ntBASIC0.5□□□□□ -2.33
UBA52P62987 RPL31P54-201ENST00000429803 370 ntBASIC0.5□□□□□ -2.33
UBA52P62987 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
UBA52P62987 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.5□□□□□ -2.33
UBA52P62987 DUXAP8-207ENST00000456786 622 ntBASIC0.5□□□□□ -2.33
UBA52P62987 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.5□□□□□ -2.33
UBA52P62987 RNA5SP291-201ENST00000517222 105 ntBASIC0.5□□□□□ -2.33
UBA52P62987 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.5□□□□□ -2.33
UBA52P62987 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.5□□□□□ -2.33
UBA52P62987 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.5□□□□□ -2.33
UBA52P62987 AL031176.1-201ENST00000604554 466 ntBASIC0.5□□□□□ -2.33
UBA52P62987 AC084824.5-201ENST00000612009 413 ntBASIC0.5□□□□□ -2.33
UBA52P62987 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.5□□□□□ -2.33
UBA52P62987 MTND1P37-201ENST00000636562 264 ntBASIC0.5□□□□□ -2.33
UBA52P62987 SNORD33-201ENST00000362761 85 ntBASIC0.49□□□□□ -2.33
UBA52P62987 Y_RNA.115-201ENST00000363272 98 ntBASIC0.49□□□□□ -2.33
UBA52P62987 MIR1262-201ENST00000408276 93 ntBASIC0.49□□□□□ -2.33
UBA52P62987 RNU2-15P-201ENST00000410692 191 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AC097463.2-201ENST00000421074 142 ntBASIC0.49□□□□□ -2.33
UBA52P62987 NANOGP2-201ENST00000435391 727 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AL161651.1-201ENST00000440882 223 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AC092685.1-201ENST00000447960 1243 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AL353691.1-201ENST00000451332 387 ntBASIC0.49□□□□□ -2.33
UBA52P62987 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.49□□□□□ -2.33
UBA52P62987 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
UBA52P62987 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
UBA52P62987 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.49□□□□□ -2.33
UBA52P62987 AP003072.2-201ENST00000527756 676 ntBASIC0.49□□□□□ -2.33
UBA52P62987 ZNF705CP-201ENST00000530515 889 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
UBA52P62987 NACAP3-201ENST00000552100 481 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.49□□□□□ -2.33
UBA52P62987 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.49□□□□□ -2.33
UBA52P62987 U2.21-201ENST00000637295 81 ntBASIC0.49□□□□□ -2.33
UBA52P62987 AC092125.1-201ENST00000562568 1995 ntBASIC0.48□□□□□ -2.33
UBA52P62987 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
UBA52P62987 Y_RNA.295-201ENST00000364918 102 ntBASIC0.48□□□□□ -2.33
UBA52P62987 MIR1267-201ENST00000408723 78 ntBASIC0.48□□□□□ -2.33
UBA52P62987 RNU2-48P-201ENST00000410694 191 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
UBA52P62987 MTND2P24-201ENST00000453434 806 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.48□□□□□ -2.33
UBA52P62987 AC108729.1-201ENST00000487812 947 ntBASIC0.48□□□□□ -2.33
UBA52P62987 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.48□□□□□ -2.33
UBA52P62987 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.48□□□□□ -2.33
UBA52P62987 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.48□□□□□ -2.33
UBA52P62987 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.48□□□□□ -2.33
UBA52P62987 SULT1C2P1-202ENST00000562418 459 ntBASIC0.48□□□□□ -2.33
UBA52P62987 ROCK1P1-201ENST00000573767 549 ntBASIC0.48□□□□□ -2.33
UBA52P62987 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.48□□□□□ -2.33
UBA52P62987 BBIP1P1-201ENST00000602999 279 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AC018618.2-201ENST00000604770 446 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AC069304.2-201ENST00000605154 435 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AL365204.3-201ENST00000612448 685 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AC095038.3-201ENST00000634439 195 ntBASIC0.48□□□□□ -2.33
UBA52P62987 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
UBA52P62987 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.48□□□□□ -2.33
UBA52P62987 RNU6-778P-201ENST00000363269 103 ntBASIC0.47□□□□□ -2.33
UBA52P62987 RNU6-1164P-201ENST00000364428 107 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.47□□□□□ -2.33
UBA52P62987 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.47□□□□□ -2.33
UBA52P62987 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
UBA52P62987 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.47□□□□□ -2.33
UBA52P62987 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
UBA52P62987 RPL21P47-201ENST00000483696 477 ntBASIC0.47□□□□□ -2.33
UBA52P62987 SNORA31.17-201ENST00000516953 127 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms