Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AL109809.4-201ENST00000603520 2185 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4XP62701 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4XP62701 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4XP62701 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 SNORA62.1-201ENST00000364287 154 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 U3.12-201ENST00000364498 214 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 SNORD14B-201ENST00000364533 90 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 MIR147B-201ENST00000390185 80 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 U3.37-201ENST00000408528 213 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4XP62701 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.3□□□□□ -2.04
RPS4XP62701 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.3□□□□□ -2.04
RPS4XP62701 AL358934.1-201ENST00000432346 324 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 RPS15AP9-201ENST00000439856 381 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4XP62701 MTATP6P26-201ENST00000445926 662 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AL441985.1-201ENST00000457727 251 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 RPS27P27-201ENST00000498779 255 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 RN7SKP298-201ENST00000515950 94 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 OR4R1P-201ENST00000529879 463 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 MIR5692A1-201ENST00000580523 69 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.3□□□□□ -2.04
RPS4XP62701 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RPS4XP62701 NBR2-204ENST00000587322 63 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.3□□□□□ -2.04
RPS4XP62701 AC010378.1-201ENST00000619270 362 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AC136475.10-201ENST00000620253 385 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4XP62701 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.3□□□□□ -2.04
RPS4XP62701 MTND4P27-201ENST00000450813 1354 ntBASIC2.3□□□□□ -2.04
RPS4XP62701 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AL359854.1-201ENST00000614203 1594 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPS4XP62701 MIR6073-201ENST00000352083 89 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 SNORD62.1-201ENST00000362541 86 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 RNU1-109P-201ENST00000383960 147 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 RNU6-1179P-201ENST00000384667 107 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 RNU6-606P-201ENST00000384721 111 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 RNU6-550P-201ENST00000391057 101 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 CIR1P3-201ENST00000405137 479 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 BX682237.1-201ENST00000415016 335 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AC016831.2-201ENST00000417179 352 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS4XP62701 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPS4XP62701 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS4XP62701 MTND2P22-201ENST00000444325 1033 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.29□□□□□ -2.04
RPS4XP62701 MTCO2P18-201ENST00000457151 658 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.29□□□□□ -2.04
RPS4XP62701 RPPH1-2P-201ENST00000516688 293 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 SCARNA3-201ENST00000517097 143 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.29□□□□□ -2.04
RPS4XP62701 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.29□□□□□ -2.04
RPS4XP62701 AC091544.4-201ENST00000555268 342 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 SUB1P2-201ENST00000556401 297 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.29□□□□□ -2.04
RPS4XP62701 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.29□□□□□ -2.04
RPS4XP62701 MIR4765-201ENST00000585007 77 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AC073648.5-201ENST00000603502 305 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS4XP62701 AC138627.2-201ENST00000624202 601 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.29□□□□□ -2.04
RPS4XP62701 AC243829.7-201ENST00000633081 225 ntBASIC2.29□□□□□ -2.04
RPS4XP62701 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.29□□□□□ -2.04
RPS4XP62701 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RPS4XP62701 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPS4XP62701 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.28□□□□□ -2.04
RPS4XP62701 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RPS4XP62701 RNU6-1287P-201ENST00000362914 107 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 RNU6-384P-201ENST00000364900 104 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RPS4XP62701 RNU6-1103P-201ENST00000384150 107 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 RNU6-1060P-201ENST00000384664 107 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 DEFB108C-201ENST00000400154 252 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.28□□□□□ -2.04
RPS4XP62701 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.28□□□□□ -2.04
RPS4XP62701 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RPS4XP62701 RPL21P90-201ENST00000415692 466 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AL353621.1-201ENST00000418219 243 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AL596276.1-201ENST00000434465 418 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 FABP5P14-201ENST00000437273 393 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.28□□□□□ -2.04
RPS4XP62701 MTND1P29-201ENST00000448112 647 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AP001324.2-201ENST00000461163 319 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 MTAPP1-201ENST00000489154 819 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AIG1P1-201ENST00000503376 148 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AC093534.1-201ENST00000504977 132 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
RPS4XP62701 AC008413.1-201ENST00000511864 177 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 RNU5B-3P-201ENST00000516601 115 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 RNA5SP503-201ENST00000517047 117 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 CKS1BP7-201ENST00000522230 235 ntBASIC2.28□□□□□ -2.04
RPS4XP62701 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.28□□□□□ -2.04
RPS4XP62701 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.28□□□□□ -2.04
RPS4XP62701 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.28□□□□□ -2.04
RPS4XP62701 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms