Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNORD114-21-201ENST00000606412 72 ntBASIC0.67□□□□□ -2.3
CKS1BP61024 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CKS1BP61024 TUG1_2.1-201ENST00000614234 87 ntBASIC0.67□□□□□ -2.3
CKS1BP61024 AC013470.4-201ENST00000619978 986 ntBASIC0.67□□□□□ -2.3
CKS1BP61024 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.66□□□□□ -2.3
CKS1BP61024 RNU6-112P-201ENST00000363599 104 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 Y_RNA.234-201ENST00000364409 97 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CKS1BP61024 RNU6-1300P-201ENST00000391046 108 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 RPL21P90-201ENST00000415692 466 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.66□□□□□ -2.3
CKS1BP61024 AC020550.1-201ENST00000447385 163 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 RPS29P29-201ENST00000456396 171 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.66□□□□□ -2.3
CKS1BP61024 RNU7-95P-201ENST00000459222 64 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 RPL30P12-201ENST00000474666 353 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AC023194.1-201ENST00000493084 308 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.66□□□□□ -2.3
CKS1BP61024 RNU2-53P-201ENST00000516257 147 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.66□□□□□ -2.3
CKS1BP61024 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.66□□□□□ -2.3
CKS1BP61024 AC018630.3-201ENST00000542637 96 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.66□□□□□ -2.3
CKS1BP61024 AP001542.2-201ENST00000593141 364 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AL022345.2-201ENST00000606307 135 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.66□□□□□ -2.3
CKS1BP61024 BX284668.6-201ENST00000606899 438 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
CKS1BP61024 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CKS1BP61024 RNU6-223P-201ENST00000362830 107 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 Y_RNA.255-201ENST00000364581 97 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 SNORA25-201ENST00000384384 134 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 RNU6-160P-201ENST00000384591 107 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 MRPL35P1-201ENST00000404272 572 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 MIR1261-201ENST00000408659 82 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 RNU4-62P-201ENST00000410125 130 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 TAF13P2-201ENST00000416876 286 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 AL589872.1-201ENST00000426602 288 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.65□□□□□ -2.31
CKS1BP61024 AL591806.2-201ENST00000433122 173 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 GTF2IP3-201ENST00000433887 494 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.65□□□□□ -2.31
CKS1BP61024 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.65□□□□□ -2.31
CKS1BP61024 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.65□□□□□ -2.31
CKS1BP61024 GTF2IP12-201ENST00000456547 356 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 RPL37P6-201ENST00000460682 294 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.65□□□□□ -2.31
CKS1BP61024 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.65□□□□□ -2.31
CKS1BP61024 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.65□□□□□ -2.31
CKS1BP61024 AC104229.1-201ENST00000561364 255 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 MIR3169-201ENST00000578032 83 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 AC005786.1-201ENST00000588553 154 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.65□□□□□ -2.31
CKS1BP61024 AC012065.4-201ENST00000602445 679 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 FARSBP1-201ENST00000435808 1778 ntBASIC0.65□□□□□ -2.31
CKS1BP61024 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.64□□□□□ -2.31
CKS1BP61024 RNU4-38P-201ENST00000364472 129 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 USP9YP33-201ENST00000412220 421 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.64□□□□□ -2.31
CKS1BP61024 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AL121578.1-201ENST00000428051 892 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.64□□□□□ -2.31
CKS1BP61024 OR2AQ1P-201ENST00000451972 200 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.64□□□□□ -2.31
CKS1BP61024 TMEM251P1-201ENST00000503717 318 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.64□□□□□ -2.31
CKS1BP61024 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.64□□□□□ -2.31
CKS1BP61024 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 RN7SKP256-201ENST00000517201 314 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
CKS1BP61024 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.64□□□□□ -2.31
CKS1BP61024 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.64□□□□□ -2.31
CKS1BP61024 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CKS1BP61024 MIR3945-201ENST00000581853 98 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AF038458.1-201ENST00000588406 262 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC090970.3-201ENST00000612566 866 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC106800.4-201ENST00000614905 153 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC009033.1-201ENST00000624279 431 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 AC241585.2-209ENST00000638217 143 ntBASIC0.64□□□□□ -2.31
CKS1BP61024 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CKS1BP61024 AC100821.1-201ENST00000523153 2479 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 RNA5SP493-201ENST00000364115 91 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 MTND1P21-201ENST00000412991 285 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.63□□□□□ -2.31
CKS1BP61024 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.63□□□□□ -2.31
CKS1BP61024 AC007000.2-201ENST00000442564 487 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 MTCYBP40-201ENST00000509390 1135 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.63□□□□□ -2.31
CKS1BP61024 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.63□□□□□ -2.31
CKS1BP61024 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.63□□□□□ -2.31
CKS1BP61024 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.63□□□□□ -2.31
CKS1BP61024 AC079148.1-201ENST00000565944 819 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 MIR4666A-201ENST00000580160 79 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.63□□□□□ -2.31
CKS1BP61024 AC012360.2-201ENST00000609349 391 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.63□□□□□ -2.31
CKS1BP61024 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms