Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MTCO3P40-201ENST00000392516 676 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 FTH1P15-201ENST00000406984 280 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RNA5SP274-201ENST00000410484 108 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.43□□□□□ -1.86
RHBDL3P58872 BX276092.3-201ENST00000424182 230 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AC018437.1-201ENST00000492214 406 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RPL9P6-201ENST00000492764 598 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AC023141.11-201ENST00000508864 202 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RNU1-86P-201ENST00000516108 154 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 SNORA40.12-201ENST00000516329 111 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 Y_RNA.687-201ENST00000516558 91 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RNU1-107P-201ENST00000516617 154 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RPPH1-2P-201ENST00000516688 293 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AP005435.4-201ENST00000529514 284 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 HIF1AP1-201ENST00000553642 175 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AC245505.1-201ENST00000556398 224 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AC012119.1-201ENST00000603184 222 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.43□□□□□ -1.86
RHBDL3P58872 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.43□□□□□ -1.86
RHBDL3P58872 AC244517.12-201ENST00000623581 663 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RHBDL3P58872 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RHBDL3P58872 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.43□□□□□ -1.86
RHBDL3P58872 AC080128.1-201ENST00000474389 1917 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC006020.1-201ENST00000420179 1854 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RHBDL3P58872 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RHBDL3P58872 RNU1-109P-201ENST00000383960 147 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 SNORD70.1-201ENST00000391007 85 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 RNU6-1158P-201ENST00000391167 107 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AL591416.1-201ENST00000404015 867 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 CIR1P3-201ENST00000405137 479 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 U6atac.2-201ENST00000408644 118 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 PGBD4P6-201ENST00000421501 610 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 NUP35P1-201ENST00000422734 947 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AL669831.1-202ENST00000428504 417 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 Z98742.2-201ENST00000431564 187 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC087499.2-201ENST00000432861 149 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 MTND3P21-201ENST00000433774 331 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC004383.1-201ENST00000438135 289 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 GTF2IP13-201ENST00000438487 386 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDL3P58872 PRPS1P1-201ENST00000445305 876 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC073415.1-201ENST00000449240 153 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 SCARNA18-201ENST00000459004 134 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 snoU109.2-201ENST00000459316 135 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC083798.1-201ENST00000472671 131 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 RPL36AP48-201ENST00000485521 314 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 RN7SL633P-201ENST00000488974 297 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDL3P58872 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDL3P58872 AC007536.1-201ENST00000533382 349 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDL3P58872 AL512310.1-201ENST00000548639 172 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.42□□□□□ -1.86
RHBDL3P58872 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.42□□□□□ -1.86
RHBDL3P58872 AL359880.1-201ENST00000621879 266 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
RHBDL3P58872 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.42□□□□□ -1.86
RHBDL3P58872 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDL3P58872 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.42□□□□□ -1.86
RHBDL3P58872 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
RHBDL3P58872 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RHBDL3P58872 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDL3P58872 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RHBDL3P58872 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RHBDL3P58872 RNU6-1127P-201ENST00000384580 107 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AL360182.1-201ENST00000397433 468 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 AL353193.1-201ENST00000421444 268 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AL606489.2-201ENST00000433886 234 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 RPL23AP22-201ENST00000437556 453 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDL3P58872 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 EEF1B2P7-201ENST00000451177 676 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AL109933.2-201ENST00000452651 260 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDL3P58872 AC080013.2-201ENST00000460866 323 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.41□□□□□ -1.86
RHBDL3P58872 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.41□□□□□ -1.86
RHBDL3P58872 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.41□□□□□ -1.86
RHBDL3P58872 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 MTND4P7-201ENST00000523876 130 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 MIR3199-1-201ENST00000582434 88 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 AC069294.1-201ENST00000608397 350 ntBASIC3.41□□□□□ -1.86
RHBDL3P58872 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RHBDL3P58872 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.41□□□□□ -1.86
RHBDL3P58872 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RHBDL3P58872 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
RHBDL3P58872 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
RHBDL3P58872 Y_RNA.399-201ENST00000383955 105 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 RNU6-843P-201ENST00000384454 104 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 RPL19P1-201ENST00000411635 428 ntBASIC3.4□□□□□ -1.87
RHBDL3P58872 OR9R1P-201ENST00000412200 877 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms