Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN12P56749 RAC1P6-201ENST00000423911 575 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 USP9YP35-201ENST00000435696 412 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 HMGB3P12-201ENST00000438745 556 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 MTND4P25-201ENST00000441039 533 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AL357134.1-201ENST00000445848 426 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AL513124.1-201ENST00000450410 614 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 UBL5P3-201ENST00000475112 231 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC068587.2-201ENST00000478386 781 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC108729.1-201ENST00000487812 947 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN12P56749 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.3□□□□□ -2.2
CLDN12P56749 AC135279.1-201ENST00000543493 504 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN12P56749 MIR3945-201ENST00000581853 98 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN12P56749 WISP1-OT1-201ENST00000602893 642 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC006270.3-201ENST00000605967 1036 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AL158163.2-201ENST00000619110 700 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC093648.1-201ENST00000623546 606 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 AC099654.8-201ENST00000637757 681 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 RBBP8P1-201ENST00000449447 1844 ntBASIC1.3□□□□□ -2.2
CLDN12P56749 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.3□□□□□ -2.2
CLDN12P56749 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN12P56749 SNORD115-3-201ENST00000363100 82 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 RNU6-1164P-201ENST00000364428 107 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 Y_RNA.534-201ENST00000384599 112 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CLDN12P56749 MIR1305-201ENST00000408300 86 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN12P56749 MTCO3P5-201ENST00000433620 714 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AL354941.1-201ENST00000438600 464 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN12P56749 RPS3AP22-201ENST00000488297 769 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.29□□□□□ -2.2
CLDN12P56749 RNU6-1315P-201ENST00000517187 99 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AP004607.1-201ENST00000524456 203 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.29□□□□□ -2.2
CLDN12P56749 MTND3P13-201ENST00000574391 343 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN12P56749 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AC174048.1-201ENST00000603389 144 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AL596327.1-201ENST00000603629 213 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN12P56749 AC093788.1-201ENST00000609356 927 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 RNU6-1192P-201ENST00000612197 107 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 RNU6-489P-201ENST00000618289 107 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.29□□□□□ -2.2
CLDN12P56749 AL512643.1-201ENST00000635735 524 ntBASIC1.29□□□□□ -2.2
CLDN12P56749 AP000648.3-201ENST00000623539 4507 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLDN12P56749 MIR424-201ENST00000362227 98 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 RNU1-62P-201ENST00000362599 164 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 RNU6-701P-201ENST00000384059 107 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 SNORA48.1-201ENST00000390879 135 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 VN1R108P-201ENST00000431580 830 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN12P56749 AC012308.1-201ENST00000451232 178 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 AMD1P1-201ENST00000457220 922 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 SNORD97-201ENST00000459187 142 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.28□□□□□ -2.2
CLDN12P56749 FAM92A1P2-202ENST00000504766 877 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 TPT1P8-201ENST00000510120 555 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 AP003392.2-201ENST00000527269 208 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 TRAV32-201ENST00000553993 340 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 MIR1273C-201ENST00000578669 77 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN12P56749 CLIC4P2-201ENST00000601934 717 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLDN12P56749 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.28□□□□□ -2.2
CLDN12P56749 AL365204.3-201ENST00000612448 685 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.28□□□□□ -2.2
CLDN12P56749 AC126544.2-201ENST00000625174 749 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.2
CLDN12P56749 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.28□□□□□ -2.2
CLDN12P56749 MTND5P42-201ENST00000637720 498 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.28□□□□□ -2.2
CLDN12P56749 AC233981.2-201ENST00000611524 1614 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLDN12P56749 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.27□□□□□ -2.21
CLDN12P56749 Y_RNA.99-201ENST00000363138 105 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CLDN12P56749 RNU6-1274P-201ENST00000384557 107 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 MIR29B2-201ENST00000385055 81 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.27□□□□□ -2.21
CLDN12P56749 CBX3P9-201ENST00000402326 552 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN12P56749 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.27□□□□□ -2.21
CLDN12P56749 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN12P56749 PTENP1-201ENST00000447117 1215 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 AC007327.1-201ENST00000447461 264 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.27□□□□□ -2.21
CLDN12P56749 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.27□□□□□ -2.21
CLDN12P56749 snoU13.14-201ENST00000459372 104 ntBASIC1.27□□□□□ -2.21
CLDN12P56749 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN12P56749 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms