Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC007458.1-201ENST00000542812 373 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AC009163.5-201ENST00000575421 637 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.79□□□□□ -1.8
GFRA1P56159 AC125232.2-201ENST00000592457 143 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AC130454.1-201ENST00000622948 401 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AC068724.3-201ENST00000625906 87 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.79□□□□□ -1.8
GFRA1P56159 MIR3529-201ENST00000637713 78 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GFRA1P56159 AP000560.1-201ENST00000624150 1937 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.79□□□□□ -1.8
GFRA1P56159 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.79□□□□□ -1.8
GFRA1P56159 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.79□□□□□ -1.8
GFRA1P56159 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GFRA1P56159 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.78□□□□□ -1.8
GFRA1P56159 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GFRA1P56159 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GFRA1P56159 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GFRA1P56159 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GFRA1P56159 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GFRA1P56159 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GFRA1P56159 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
GFRA1P56159 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GFRA1P56159 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GFRA1P56159 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GFRA1P56159 Y_RNA.396-201ENST00000383949 103 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 MIR1302-6-201ENST00000408466 90 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.78□□□□□ -1.8
GFRA1P56159 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.78□□□□□ -1.8
GFRA1P56159 AC092017.2-201ENST00000427600 362 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC005300.1-201ENST00000428401 373 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 Z82188.1-201ENST00000436709 154 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 RPL23AP46-201ENST00000438548 490 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC007969.2-201ENST00000441891 191 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC009296.1-201ENST00000443146 155 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.78□□□□□ -1.8
GFRA1P56159 AL031659.1-201ENST00000447075 539 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 RPL23AP75-201ENST00000491601 451 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC104564.1-201ENST00000493028 407 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 RNU6-897P-201ENST00000517135 105 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 RNU6-794P-201ENST00000517261 64 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC006199.1-201ENST00000548728 219 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AL442163.3-201ENST00000554110 156 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.78□□□□□ -1.8
GFRA1P56159 AC007224.1-201ENST00000564410 144 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 MIR3160-1-201ENST00000577972 85 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.78□□□□□ -1.8
GFRA1P56159 AC078899.3-201ENST00000599065 212 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 AC103858.2-201ENST00000621471 543 ntBASIC3.78□□□□□ -1.8
GFRA1P56159 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.78□□□□□ -1.8
GFRA1P56159 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.78□□□□□ -1.8
GFRA1P56159 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.78□□□□□ -1.8
GFRA1P56159 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
GFRA1P56159 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
GFRA1P56159 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
GFRA1P56159 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
GFRA1P56159 RNU1-15P-201ENST00000353977 144 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RNU6-770P-201ENST00000363929 105 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RNU1-13P-201ENST00000384499 162 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RPL21P75-201ENST00000396599 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RPL21P28-201ENST00000401418 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 HDGFP1-201ENST00000405943 252 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RNU6-847P-201ENST00000411115 108 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AL160275.2-201ENST00000412010 394 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AL590556.1-201ENST00000423231 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AP000907.1-201ENST00000428428 510 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 OR4C10P-201ENST00000434991 931 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.77□□□□□ -1.81
GFRA1P56159 RPEP5-201ENST00000441137 268 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.77□□□□□ -1.81
GFRA1P56159 RPL21P11-201ENST00000461458 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RPL21P39-201ENST00000463605 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 SNRPGP7-201ENST00000469016 106 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC087190.1-201ENST00000484462 480 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC107032.1-201ENST00000485945 480 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC132942.1-201ENST00000486753 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AF213884.1-201ENST00000488102 463 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.77□□□□□ -1.81
GFRA1P56159 AC093591.1-201ENST00000491435 481 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RPL21P16-201ENST00000495531 483 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.77□□□□□ -1.81
GFRA1P56159 RNU5F-8P-201ENST00000515941 111 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.77□□□□□ -1.81
GFRA1P56159 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GFRA1P56159 HSPE1P20-201ENST00000538133 289 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC016256.1-201ENST00000547971 354 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.77□□□□□ -1.81
GFRA1P56159 HMGN2P15-201ENST00000585707 270 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.77□□□□□ -1.81
GFRA1P56159 AC024220.1-201ENST00000603675 484 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RPL23AP88-201ENST00000605759 454 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 RMST_6.1-201ENST00000611980 203 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 ZYXP1-201ENST00000617638 118 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 AC091903.1-201ENST00000624322 454 ntBASIC3.77□□□□□ -1.81
GFRA1P56159 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms