Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PKNOX1P55347 RNU4-21P-201ENST00000362802 126 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
PKNOX1P55347 CISD1P1-201ENST00000393907 327 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 RNU2-39P-201ENST00000410604 198 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 NPM1P11-201ENST00000417106 855 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.01□□□□□ -2.09
PKNOX1P55347 USP9YP8-201ENST00000441913 500 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.01□□□□□ -2.09
PKNOX1P55347 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PKNOX1P55347 AC090515.1-201ENST00000465295 476 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX1P55347 RPL36AP48-201ENST00000485521 314 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC018437.1-201ENST00000492214 406 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 SCARNA24.1-201ENST00000516465 137 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX1P55347 AC079598.5-201ENST00000547460 117 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC009063.1-201ENST00000563342 702 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
PKNOX1P55347 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX1P55347 AL670379.10-201ENST00000604330 253 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AL158032.1-201ENST00000605401 106 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AL670379.9-201ENST00000605428 253 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX1P55347 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.01□□□□□ -2.09
PKNOX1P55347 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
PKNOX1P55347 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
PKNOX1P55347 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2□□□□□ -2.09
PKNOX1P55347 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
PKNOX1P55347 RNU6-169P-201ENST00000365336 107 ntBASIC2□□□□□ -2.09
PKNOX1P55347 RNU6-61P-201ENST00000365528 109 ntBASIC2□□□□□ -2.09
PKNOX1P55347 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX1P55347 SNORA20.2-201ENST00000383922 131 ntBASIC2□□□□□ -2.09
PKNOX1P55347 Y_RNA.623-201ENST00000411128 95 ntBASIC2□□□□□ -2.09
PKNOX1P55347 RPS3AP3-201ENST00000411933 242 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AL353621.1-201ENST00000418219 243 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AC097463.2-201ENST00000421074 142 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AL365338.1-201ENST00000422282 858 ntBASIC2□□□□□ -2.09
PKNOX1P55347 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2□□□□□ -2.09
PKNOX1P55347 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2□□□□□ -2.09
PKNOX1P55347 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2□□□□□ -2.09
PKNOX1P55347 AC124916.1-201ENST00000444020 547 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2□□□□□ -2.09
PKNOX1P55347 AL441985.1-201ENST00000457727 251 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AC112771.1-201ENST00000463581 102 ntBASIC2□□□□□ -2.09
PKNOX1P55347 RPL22P13-201ENST00000493291 347 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX1P55347 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2□□□□□ -2.09
PKNOX1P55347 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX1P55347 AC117522.2-201ENST00000510049 657 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX1P55347 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2□□□□□ -2.09
PKNOX1P55347 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2□□□□□ -2.09
PKNOX1P55347 CYCSP26-201ENST00000534107 320 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AC092325.1-201ENST00000566449 554 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2□□□□□ -2.09
PKNOX1P55347 BNIP3P8-201ENST00000597863 560 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AC087045.1-201ENST00000605856 382 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AL121992.2-201ENST00000606262 256 ntBASIC2□□□□□ -2.09
PKNOX1P55347 AL139286.2-201ENST00000606838 396 ntBASIC2□□□□□ -2.09
PKNOX1P55347 DLEU1_1.1-201ENST00000618107 190 ntBASIC2□□□□□ -2.09
PKNOX1P55347 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PKNOX1P55347 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PKNOX1P55347 SNORD14B-201ENST00000364533 90 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 RNU6-641P-201ENST00000384006 107 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 MIR578-201ENST00000384828 96 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AL445529.1-201ENST00000398713 389 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PKNOX1P55347 EEF1A1P40-201ENST00000412883 573 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX1P55347 EIF4EP4-201ENST00000424916 578 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 RPL7P34-201ENST00000433316 712 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX1P55347 AL022238.1-201ENST00000442557 355 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC117503.1-201ENST00000472241 394 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AL049873.1-201ENST00000480540 376 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX1P55347 AC068781.1-201ENST00000488231 618 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 RBBP4P6-201ENST00000508098 202 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.99□□□□□ -2.09
PKNOX1P55347 AC117522.1-201ENST00000509821 380 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AF213884.2-201ENST00000510417 903 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 RNU5B-3P-201ENST00000516601 115 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC060788.1-201ENST00000521318 469 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX1P55347 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.99□□□□□ -2.09
PKNOX1P55347 ADI1P3-201ENST00000549509 470 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX1P55347 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.99□□□□□ -2.09
PKNOX1P55347 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC008521.1-201ENST00000587471 187 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AL603755.1-201ENST00000619504 163 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AC091304.6-201ENST00000619761 202 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
PKNOX1P55347 AL157786.1-207ENST00000627771 695 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms