Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.19□□□□□ -2.06
COL4A4P53420 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.19□□□□□ -2.06
COL4A4P53420 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A4P53420 RMST_7.1-201ENST00000621935 268 ntBASIC2.19□□□□□ -2.06
COL4A4P53420 C2orf27A-204ENST00000623058 969 ntBASIC2.19□□□□□ -2.06
COL4A4P53420 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A4P53420 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A4P53420 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A4P53420 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A4P53420 Y_RNA.145-201ENST00000363527 102 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNU6-289P-201ENST00000364093 107 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 Y_RNA.381-201ENST00000365666 102 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A4P53420 RNU6-730P-201ENST00000383954 104 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 SNORA32.2-201ENST00000384049 122 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 U8.14-201ENST00000390843 143 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A4P53420 AL354751.2-201ENST00000415471 210 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL096701.2-201ENST00000416920 238 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL353193.1-201ENST00000421444 268 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 MTCO2P12-201ENST00000427426 682 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A4P53420 TAAR7P-201ENST00000436141 242 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RPL22P17-201ENST00000438729 315 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 SEPT14P3-201ENST00000439401 183 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL732372.2-207ENST00000445840 183 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 SEPT14P2-201ENST00000453405 183 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RPS27P23-201ENST00000487608 251 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RPS15AP36-201ENST00000492022 382 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC112204.1-201ENST00000502591 103 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 AC093809.1-201ENST00000509155 340 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A4P53420 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A4P53420 SEPT14P4-201ENST00000513445 186 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 Y_RNA.672-201ENST00000516289 104 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 HIGD1AP6-201ENST00000521833 279 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 FO082796.1-201ENST00000523795 183 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AP003181.2-201ENST00000528941 181 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 AC124312.5-201ENST00000604451 268 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC097468.3-201ENST00000607956 456 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RMST_3.1-201ENST00000611651 109 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC034102.8-201ENST00000615146 484 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL356585.4-201ENST00000623078 1229 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 TPTEP1-208ENST00000636884 213 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 U6.98-201ENST00000637157 84 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A4P53420 AC010329.2-201ENST00000595195 2737 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC010680.1-201ENST00000590024 3590 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A4P53420 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL4A4P53420 MTND5P16-201ENST00000460269 1703 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 NUP58P1-201ENST00000502546 1738 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 Y_RNA.72-201ENST00000362894 103 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 SNORA63C-201ENST00000364578 129 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNU6-108P-201ENST00000365558 107 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 SNORD42.2-201ENST00000365570 69 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNU6-474P-201ENST00000384243 107 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNU6-1151P-201ENST00000384684 107 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 SNORA40.18-201ENST00000391200 128 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RPL23AP32-201ENST00000395315 459 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL034374.1-201ENST00000406329 351 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNU6-1140P-201ENST00000410517 106 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 ELOCP4-201ENST00000420090 333 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 AL353777.1-201ENST00000425552 326 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A4P53420 AL035410.1-201ENST00000427409 427 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.18□□□□□ -2.06
COL4A4P53420 AC023347.2-201ENST00000433994 462 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL353597.2-202ENST00000434901 373 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL136380.1-201ENST00000447970 162 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 MTND3P16-201ENST00000452205 344 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC027575.1-201ENST00000481064 460 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AL163540.1-201ENST00000485382 386 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC078918.1-201ENST00000498515 228 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 Vault.3-201ENST00000516676 95 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNU2-46P-201ENST00000517038 113 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.18□□□□□ -2.06
COL4A4P53420 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 AC090751.1-201ENST00000566966 267 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC093249.1-201ENST00000567049 203 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC112191.3-201ENST00000604371 277 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.18□□□□□ -2.06
COL4A4P53420 AC090971.5-201ENST00000621102 293 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC024940.5-201ENST00000622889 474 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC000123.2-201ENST00000623124 461 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC145207.9-201ENST00000623802 325 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 AC091953.2-201ENST00000623979 160 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 RNF6P1-201ENST00000444889 1784 ntBASIC2.18□□□□□ -2.06
COL4A4P53420 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A4P53420 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
COL4A4P53420 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.17□□□□□ -2.06
COL4A4P53420 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms