Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL590084.2-201ENST00000401481 382 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL158050.1-201ENST00000416077 457 ntBASIC1.05□□□□□ -2.24
NUP98P52948 RPS15AP9-201ENST00000439856 381 ntBASIC1.05□□□□□ -2.24
NUP98P52948 GXYLT1P1-201ENST00000446657 490 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.05□□□□□ -2.24
NUP98P52948 AL590365.1-201ENST00000450788 243 ntBASIC1.05□□□□□ -2.24
NUP98P52948 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.05□□□□□ -2.24
NUP98P52948 MTCYBP16-201ENST00000509187 1129 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC093677.1-201ENST00000514414 678 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.05□□□□□ -2.24
NUP98P52948 AC008269.2-201ENST00000561915 1105 ntBASIC1.05□□□□□ -2.24
NUP98P52948 ZNF92P2-201ENST00000600543 1059 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL391646.1-201ENST00000603860 190 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC091152.3-201ENST00000604227 325 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL359314.1-201ENST00000616913 261 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.05□□□□□ -2.24
NUP98P52948 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NUP98P52948 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.05□□□□□ -2.24
NUP98P52948 MIR16-2-201ENST00000362117 81 ntBASIC1.05□□□□□ -2.24
NUP98P52948 RNU4-41P-201ENST00000364426 143 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC078974.1-201ENST00000411597 223 ntBASIC1.05□□□□□ -2.24
NUP98P52948 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.05□□□□□ -2.24
NUP98P52948 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.05□□□□□ -2.24
NUP98P52948 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.05□□□□□ -2.24
NUP98P52948 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.05□□□□□ -2.24
NUP98P52948 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.05□□□□□ -2.24
NUP98P52948 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.05□□□□□ -2.24
NUP98P52948 SUB1P4-201ENST00000566062 339 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL512605.2-201ENST00000592972 256 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL078605.1-201ENST00000603529 500 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC010900.2-201ENST00000604508 210 ntBASIC1.05□□□□□ -2.24
NUP98P52948 PRR13P7-201ENST00000605538 430 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL020996.3-201ENST00000606617 222 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC103810.8-201ENST00000607347 118 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.05□□□□□ -2.24
NUP98P52948 AL109620.1-201ENST00000618738 1197 ntBASIC1.05□□□□□ -2.24
NUP98P52948 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.05□□□□□ -2.24
NUP98P52948 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NUP98P52948 AL591034.2-201ENST00000402839 359 ntBASIC1.04□□□□□ -2.24
NUP98P52948 RNU6-575P-201ENST00000411326 105 ntBASIC1.04□□□□□ -2.24
NUP98P52948 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.04□□□□□ -2.24
NUP98P52948 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.04□□□□□ -2.24
NUP98P52948 RNU1-98P-201ENST00000458992 160 ntBASIC1.04□□□□□ -2.24
NUP98P52948 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP98P52948 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.04□□□□□ -2.24
NUP98P52948 AC010468.3-201ENST00000508225 458 ntBASIC1.04□□□□□ -2.24
NUP98P52948 AC008628.1-201ENST00000508663 265 ntBASIC1.04□□□□□ -2.24
NUP98P52948 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.04□□□□□ -2.24
NUP98P52948 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.04□□□□□ -2.24
NUP98P52948 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.04□□□□□ -2.24
NUP98P52948 CYB5AP5-201ENST00000549779 389 ntBASIC1.04□□□□□ -2.24
NUP98P52948 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP98P52948 AC018638.7-201ENST00000605836 1114 ntBASIC1.04□□□□□ -2.24
NUP98P52948 AL357080.1-201ENST00000617394 239 ntBASIC1.04□□□□□ -2.24
NUP98P52948 MIR1322-201ENST00000638013 71 ntBASIC1.04□□□□□ -2.24
NUP98P52948 AL442644.1-201ENST00000454390 3105 ntBASIC1.04□□□□□ -2.24
NUP98P52948 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.03□□□□□ -2.24
NUP98P52948 MTND1P28-201ENST00000435623 950 ntBASIC1.03□□□□□ -2.24
NUP98P52948 MTND2P29-201ENST00000438595 412 ntBASIC1.03□□□□□ -2.24
NUP98P52948 USP9YP22-201ENST00000438971 294 ntBASIC1.03□□□□□ -2.24
NUP98P52948 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP98P52948 FCF1P6-201ENST00000456841 595 ntBASIC1.03□□□□□ -2.24
NUP98P52948 AC108729.2-201ENST00000476543 840 ntBASIC1.03□□□□□ -2.24
NUP98P52948 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP98P52948 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.03□□□□□ -2.24
NUP98P52948 AP003497.1-201ENST00000528472 562 ntBASIC1.03□□□□□ -2.24
NUP98P52948 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP98P52948 AC005730.3-201ENST00000583067 366 ntBASIC1.03□□□□□ -2.24
NUP98P52948 BBIP1P1-201ENST00000602999 279 ntBASIC1.03□□□□□ -2.24
NUP98P52948 AC021646.1-201ENST00000605469 484 ntBASIC1.03□□□□□ -2.24
NUP98P52948 AC003001.2-201ENST00000616294 831 ntBASIC1.03□□□□□ -2.24
NUP98P52948 U1.36-201ENST00000620684 176 ntBASIC1.03□□□□□ -2.24
NUP98P52948 Z99571.1-201ENST00000636677 394 ntBASIC1.03□□□□□ -2.24
NUP98P52948 SNORD114-2-201ENST00000363953 78 ntBASIC1.03□□□□□ -2.25
NUP98P52948 RNU1-39P-201ENST00000383897 165 ntBASIC1.03□□□□□ -2.25
NUP98P52948 RNU6-114P-201ENST00000384704 105 ntBASIC1.03□□□□□ -2.25
NUP98P52948 RNU2-32P-201ENST00000411193 191 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC009310.1-201ENST00000414414 451 ntBASIC1.03□□□□□ -2.25
NUP98P52948 SDAD1P3-201ENST00000427380 333 ntBASIC1.03□□□□□ -2.25
NUP98P52948 GPM6BP2-201ENST00000432046 144 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.03□□□□□ -2.25
NUP98P52948 AL022238.1-201ENST00000442557 355 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC118469.1-201ENST00000442943 488 ntBASIC1.03□□□□□ -2.25
NUP98P52948 GPM6BP1-201ENST00000446387 144 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC245102.2-201ENST00000448956 180 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC013267.1-201ENST00000458227 267 ntBASIC1.03□□□□□ -2.25
NUP98P52948 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.03□□□□□ -2.25
NUP98P52948 AC110760.3-202ENST00000515177 371 ntBASIC1.03□□□□□ -2.25
NUP98P52948 RN7SKP258-201ENST00000517151 304 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AP001189.2-201ENST00000527320 189 ntBASIC1.03□□□□□ -2.25
NUP98P52948 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.03□□□□□ -2.25
NUP98P52948 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.03□□□□□ -2.25
NUP98P52948 AC233702.2-202ENST00000562547 291 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC004987.4-201ENST00000603383 338 ntBASIC1.03□□□□□ -2.25
NUP98P52948 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.03□□□□□ -2.25
NUP98P52948 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.03□□□□□ -2.25
NUP98P52948 TEX21P-201ENST00000447107 1476 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC009541.1-201ENST00000438279 2662 ntBASIC1.03□□□□□ -2.25
NUP98P52948 AC121333.1-201ENST00000567488 2709 ntBASIC1.02□□□□□ -2.25
NUP98P52948 U6.112-201ENST00000384129 70 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms