Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU6-395P-201ENST00000365662 106 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CLCN3P51790 RNU6-903P-201ENST00000391270 109 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCN3P51790 RNU6-1148P-201ENST00000410992 104 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 NDUFS5P4-201ENST00000412983 318 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCN3P51790 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.05□□□□□ -1.92
CLCN3P51790 MTCYBP8-201ENST00000422855 651 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 HMGN2P30-201ENST00000423237 256 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCN3P51790 BRK1P2-201ENST00000442875 223 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 RPL12P25-201ENST00000455592 494 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AMD1P1-201ENST00000457220 922 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 HMGN2P26-201ENST00000463169 339 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 TRBV1-201ENST00000476502 284 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 RN7SL283P-201ENST00000489055 303 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 EIF4EP3-201ENST00000498782 656 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 RBBP4P6-201ENST00000508098 202 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AC046134.1-201ENST00000514454 666 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 RNU6-703P-201ENST00000516946 107 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCN3P51790 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
CLCN3P51790 AL391261.3-201ENST00000557194 520 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AL157871.3-201ENST00000557231 293 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 ZNF861P-201ENST00000588126 639 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AC018638.8-201ENST00000588755 281 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AC010525.2-201ENST00000590920 195 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AL138889.2-201ENST00000603883 242 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 AL158032.1-201ENST00000605401 106 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCN3P51790 AC009033.1-201ENST00000624279 431 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCN3P51790 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCN3P51790 MIR449A-201ENST00000362113 91 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNU6-552P-201ENST00000362869 119 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNU6-1287P-201ENST00000362914 107 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNU6-778P-201ENST00000363269 103 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 U3.12-201ENST00000364498 214 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 SNORA4.3-201ENST00000365564 137 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNU6-1060P-201ENST00000384664 107 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 MIR34A-201ENST00000385130 110 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CLCN3P51790 RNU6-550P-201ENST00000391057 101 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 CISD1P1-201ENST00000393907 327 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNA5SP21-201ENST00000410917 96 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNU6-373P-201ENST00000411247 98 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCN3P51790 RPL7P46-201ENST00000425129 740 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 ARL5AP4-201ENST00000430731 512 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCN3P51790 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 MTND1P11-201ENST00000456661 876 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RPS29P15-201ENST00000458329 171 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 RNU7-180P-201ENST00000459240 63 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC006512.1-201ENST00000468816 291 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCN3P51790 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCN3P51790 AC010486.1-201ENST00000511793 424 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC010265.1-201ENST00000513509 211 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.04□□□□□ -1.92
CLCN3P51790 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.04□□□□□ -1.92
CLCN3P51790 AC069234.5-201ENST00000611056 416 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC004852.3-201ENST00000614131 326 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CLCN3P51790 AC099654.5-201ENST00000636479 350 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 AL079305.1-201ENST00000623159 3008 ntBASIC3.04□□□□□ -1.92
CLCN3P51790 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCN3P51790 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCN3P51790 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCN3P51790 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCN3P51790 AC008264.2-201ENST00000610193 3731 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLCN3P51790 ASNSP3-201ENST00000451989 1306 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLCN3P51790 AC103988.1-201ENST00000566382 2177 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 Y_RNA.33-201ENST00000362591 102 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 Y_RNA.166-201ENST00000363730 102 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 Y_RNA.167-201ENST00000363735 109 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 RNU6-522P-201ENST00000364497 107 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 Y_RNA.263-201ENST00000364659 114 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 RNU1-73P-201ENST00000383971 164 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCN3P51790 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCN3P51790 PDCL2P1-201ENST00000419302 352 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.03□□□□□ -1.92
CLCN3P51790 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCN3P51790 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AC104058.1-201ENST00000448028 297 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.03□□□□□ -1.92
CLCN3P51790 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AP004217.1-201ENST00000480579 346 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AC114786.4-201ENST00000508771 728 ntBASIC3.03□□□□□ -1.92
CLCN3P51790 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCN3P51790 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms