Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RNU6-1069P-201ENST00000516612 133 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 RNU6-928P-201ENST00000516876 104 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.47□□□□□ -1.85
CPT1AP50416 AC243960.4-201ENST00000600532 288 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 AL117336.2-201ENST00000602435 335 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 AC008962.1-201ENST00000605729 304 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.47□□□□□ -1.85
CPT1AP50416 AL022345.1-201ENST00000607292 135 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 MIR6076-201ENST00000617521 113 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.47□□□□□ -1.85
CPT1AP50416 TPTEP1-208ENST00000636884 213 ntBASIC3.47□□□□□ -1.85
CPT1AP50416 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CPT1AP50416 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CPT1AP50416 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CPT1AP50416 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CPT1AP50416 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CPT1AP50416 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CPT1AP50416 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.46□□□□□ -1.85
CPT1AP50416 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CPT1AP50416 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CPT1AP50416 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.46□□□□□ -1.86
CPT1AP50416 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CPT1AP50416 RNU6-1035P-201ENST00000384477 107 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 RNU2-3P-201ENST00000410144 191 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 CYCSP33-201ENST00000414485 327 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 EEF1A1P41-201ENST00000414667 207 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.46□□□□□ -1.86
CPT1AP50416 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.46□□□□□ -1.86
CPT1AP50416 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.46□□□□□ -1.86
CPT1AP50416 AL590664.1-201ENST00000448065 339 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.46□□□□□ -1.86
CPT1AP50416 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.46□□□□□ -1.86
CPT1AP50416 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.46□□□□□ -1.86
CPT1AP50416 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.46□□□□□ -1.86
CPT1AP50416 RNU1-86P-201ENST00000516108 154 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 MIR892C-201ENST00000516410 77 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 RNU1-107P-201ENST00000516617 154 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 RNU6-572P-201ENST00000516724 80 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 RNU6-273P-201ENST00000516937 96 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 SNORA31.19-201ENST00000517079 126 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 SNORA25.17-201ENST00000517184 124 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.46□□□□□ -1.86
CPT1AP50416 AP000889.2-201ENST00000532684 490 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 AC011602.1-201ENST00000546484 331 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 HMGB1P14-201ENST00000557424 591 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 AMZ2P1-203ENST00000565833 850 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.46□□□□□ -1.86
CPT1AP50416 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.46□□□□□ -1.86
CPT1AP50416 MIR5692C1-201ENST00000585309 91 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 AC006023.1-201ENST00000603944 259 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.46□□□□□ -1.86
CPT1AP50416 AL133216.2-202ENST00000634512 349 ntBASIC3.46□□□□□ -1.86
CPT1AP50416 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CPT1AP50416 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CPT1AP50416 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CPT1AP50416 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CPT1AP50416 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.45□□□□□ -1.86
CPT1AP50416 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CPT1AP50416 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CPT1AP50416 Y_RNA.184-201ENST00000363884 108 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 Y_RNA.529-201ENST00000384586 119 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 SNORA40C-201ENST00000391285 128 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 MIR450B-201ENST00000401182 78 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.45□□□□□ -1.86
CPT1AP50416 AC007560.1-201ENST00000426912 237 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 HMGB1P18-201ENST00000438801 619 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.45□□□□□ -1.86
CPT1AP50416 BRK1P2-201ENST00000442875 223 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.45□□□□□ -1.86
CPT1AP50416 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.45□□□□□ -1.86
CPT1AP50416 AL583843.1-201ENST00000456070 346 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 RPL7P43-201ENST00000478876 753 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 RPL30P14-201ENST00000482744 348 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.45□□□□□ -1.86
CPT1AP50416 RNU6-256P-201ENST00000516747 97 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 SNORD59.2-201ENST00000516873 68 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 RNU6-323P-201ENST00000521915 107 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 RPS3AP23-202ENST00000574601 686 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.45□□□□□ -1.86
CPT1AP50416 MIR3609-201ENST00000582661 80 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.45□□□□□ -1.86
CPT1AP50416 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.45□□□□□ -1.86
CPT1AP50416 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.45□□□□□ -1.86
CPT1AP50416 C8orf59P2-201ENST00000603441 271 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 HSPE1P7-201ENST00000604681 321 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 RMST_4.1-201ENST00000616886 107 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 RMST_7.1-201ENST00000621935 268 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.45□□□□□ -1.86
CPT1AP50416 AC112487.2-201ENST00000637950 304 ntBASIC3.45□□□□□ -1.86
CPT1AP50416 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.45□□□□□ -1.86
CPT1AP50416 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CPT1AP50416 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CPT1AP50416 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CPT1AP50416 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CPT1AP50416 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CPT1AP50416 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms