Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SLC6A12P48065 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SLC6A12P48065 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SLC6A12P48065 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SLC6A12P48065 OR4G1P-203ENST00000641984 1631 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 SNORA72.1-201ENST00000363485 129 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 Y_RNA.167-201ENST00000363735 109 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 RNU6-522P-201ENST00000364497 107 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 Y_RNA.279-201ENST00000364763 95 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 SNORA18.3-201ENST00000384122 132 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 RNU6-190P-201ENST00000384154 102 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 Y_RNA.534-201ENST00000384599 112 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SLC6A12P48065 RNU6-876P-201ENST00000391295 104 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AL122016.1-201ENST00000403365 367 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AL078595.1-201ENST00000404458 226 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A12P48065 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.69□□□□□ -1.98
SLC6A12P48065 CALM2P2-201ENST00000428512 440 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A12P48065 MTND3P16-201ENST00000452205 344 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 HMGN2P26-201ENST00000463169 339 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC018710.1-201ENST00000506509 158 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 HIGD1AP13-201ENST00000509878 289 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 RNA5SP385-201ENST00000515947 110 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 RNU1-103P-201ENST00000516502 125 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 Y_RNA.689-201ENST00000516589 107 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC174048.1-201ENST00000603389 144 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC069234.5-201ENST00000611056 416 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC034102.8-201ENST00000615146 484 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A12P48065 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A12P48065 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC6A12P48065 HSPA8P4-201ENST00000511877 1920 ntBASIC2.69□□□□□ -1.98
SLC6A12P48065 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A12P48065 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC6A12P48065 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A12P48065 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A12P48065 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SLC6A12P48065 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SLC6A12P48065 Y_RNA.86-201ENST00000363020 111 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RNU6-288P-201ENST00000363690 104 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 SNORA80A-201ENST00000363922 136 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 SNORD56.5-201ENST00000364281 72 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RNU5E-4P-201ENST00000364931 120 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SLC6A12P48065 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A12P48065 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RNA5SP118-201ENST00000410385 109 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RNU6-387P-201ENST00000411331 105 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AC023141.4-201ENST00000412031 328 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 EEF1A1P40-201ENST00000412883 573 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 OR6C66P-201ENST00000414917 930 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RPS15AP5-201ENST00000436276 388 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AL121601.2-201ENST00000438019 707 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AL135938.1-201ENST00000443141 297 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A12P48065 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A12P48065 RPL37P6-201ENST00000460682 294 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RPL23AP11-201ENST00000475260 469 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A12P48065 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RNU4-29P-201ENST00000515943 174 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC6A12P48065 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A12P48065 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 CYCSP39-201ENST00000565821 309 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AC103810.1-201ENST00000579873 453 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 NRBF2P5-201ENST00000603087 788 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AC098826.3-201ENST00000603823 466 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AL161798.1-201ENST00000604630 131 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 RNU6-89P-201ENST00000606519 100 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 AC022893.3-201ENST00000607665 437 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 U6.42-201ENST00000618440 107 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A12P48065 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SLC6A12P48065 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC6A12P48065 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
SLC6A12P48065 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A12P48065 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A12P48065 AL359693.1-201ENST00000614959 2407 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 NACAP2-201ENST00000318548 624 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 Y_RNA.160-201ENST00000363677 92 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 Y_RNA.231-201ENST00000364358 102 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 RNU6-7-201ENST00000364784 107 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 RNU6-8-201ENST00000365467 107 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 RNU6-1127P-201ENST00000384580 107 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SLC6A12P48065 AL031121.1-201ENST00000406553 254 ntBASIC2.67□□□□□ -1.98
SLC6A12P48065 RNU4-46P-201ENST00000410818 138 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms