Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RPS29P2-201ENST00000479278 136 ntBASIC2.45□□□□□ -2.02
CDX1P47902 RPL9P6-201ENST00000492764 598 ntBASIC2.45□□□□□ -2.02
CDX1P47902 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX1P47902 AIG1P1-201ENST00000503376 148 ntBASIC2.45□□□□□ -2.02
CDX1P47902 MTND2P33-201ENST00000506452 1031 ntBASIC2.45□□□□□ -2.02
CDX1P47902 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX1P47902 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.45□□□□□ -2.02
CDX1P47902 RPPH1-2P-201ENST00000516688 293 ntBASIC2.45□□□□□ -2.02
CDX1P47902 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.45□□□□□ -2.02
CDX1P47902 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.45□□□□□ -2.02
CDX1P47902 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.45□□□□□ -2.02
CDX1P47902 HULC.1-201ENST00000612720 240 ntBASIC2.45□□□□□ -2.02
CDX1P47902 RMST_4.1-201ENST00000616886 107 ntBASIC2.45□□□□□ -2.02
CDX1P47902 AC138627.2-201ENST00000624202 601 ntBASIC2.45□□□□□ -2.02
CDX1P47902 MIR3529-201ENST00000637713 78 ntBASIC2.45□□□□□ -2.02
CDX1P47902 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.45□□□□□ -2.02
CDX1P47902 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX1P47902 Z75746.1-201ENST00000440243 2080 ntBASIC2.45□□□□□ -2.02
CDX1P47902 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDX1P47902 AC006020.1-201ENST00000420179 1854 ntBASIC2.44□□□□□ -2.02
CDX1P47902 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX1P47902 MIR422A-201ENST00000362286 90 ntBASIC2.44□□□□□ -2.02
CDX1P47902 RNU6-942P-201ENST00000363002 107 ntBASIC2.44□□□□□ -2.02
CDX1P47902 Y_RNA.481-201ENST00000384373 102 ntBASIC2.44□□□□□ -2.02
CDX1P47902 SNORD116-20-201ENST00000384529 92 ntBASIC2.44□□□□□ -2.02
CDX1P47902 RNU6-1127P-201ENST00000384580 107 ntBASIC2.44□□□□□ -2.02
CDX1P47902 SNORD37.1-201ENST00000390968 65 ntBASIC2.44□□□□□ -2.02
CDX1P47902 MTCO3P40-201ENST00000392516 676 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AL138885.1-201ENST00000405921 675 ntBASIC2.44□□□□□ -2.02
CDX1P47902 RNU2-3P-201ENST00000410144 191 ntBASIC2.44□□□□□ -2.02
CDX1P47902 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX1P47902 HMGB1P31-201ENST00000437242 427 ntBASIC2.44□□□□□ -2.02
CDX1P47902 RPL7P54-201ENST00000438336 674 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AL671855.1-201ENST00000446875 1203 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX1P47902 AC112771.1-201ENST00000463581 102 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AC090525.1-201ENST00000479116 478 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AC096576.1-201ENST00000489014 359 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AC006445.1-201ENST00000491925 405 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX1P47902 RPL7P20-201ENST00000520308 745 ntBASIC2.44□□□□□ -2.02
CDX1P47902 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX1P47902 AL137161.1-201ENST00000532231 390 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX1P47902 HIF1AP1-201ENST00000553642 175 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.44□□□□□ -2.02
CDX1P47902 AC138761.3-201ENST00000579993 334 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.44□□□□□ -2.02
CDX1P47902 RNU6-91P-201ENST00000607774 107 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AP001596.2-201ENST00000608410 312 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AC096772.1-201ENST00000609146 564 ntBASIC2.44□□□□□ -2.02
CDX1P47902 AL162274.2-201ENST00000614406 332 ntBASIC2.44□□□□□ -2.02
CDX1P47902 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
CDX1P47902 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX1P47902 AL139276.1-201ENST00000311910 1001 ntBASIC2.43□□□□□ -2.02
CDX1P47902 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CDX1P47902 RNU6-1085P-201ENST00000363576 107 ntBASIC2.43□□□□□ -2.02
CDX1P47902 Y_RNA.255-201ENST00000364581 97 ntBASIC2.43□□□□□ -2.02
CDX1P47902 Y_RNA.324-201ENST00000365165 102 ntBASIC2.43□□□□□ -2.02
CDX1P47902 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CDX1P47902 AL606923.1-201ENST00000406616 190 ntBASIC2.43□□□□□ -2.02
CDX1P47902 Z92545.1-201ENST00000411782 234 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC096664.2-201ENST00000411843 406 ntBASIC2.43□□□□□ -2.02
CDX1P47902 CYCSP33-201ENST00000414485 327 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AL451074.5-201ENST00000415894 435 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX1P47902 RPS12P18-201ENST00000442381 270 ntBASIC2.43□□□□□ -2.02
CDX1P47902 MTND1P1-201ENST00000445453 368 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC073415.1-201ENST00000449240 153 ntBASIC2.43□□□□□ -2.02
CDX1P47902 PSPHP1-201ENST00000450062 261 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX1P47902 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX1P47902 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX1P47902 S100A11P2-201ENST00000467589 312 ntBASIC2.43□□□□□ -2.02
CDX1P47902 RN7SL297P-201ENST00000483161 293 ntBASIC2.43□□□□□ -2.02
CDX1P47902 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX1P47902 MTCO3P9-201ENST00000506989 781 ntBASIC2.43□□□□□ -2.02
CDX1P47902 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX1P47902 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX1P47902 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX1P47902 CR383656.8-201ENST00000549046 145 ntBASIC2.43□□□□□ -2.02
CDX1P47902 LRRC37A5P-203ENST00000580181 585 ntBASIC2.43□□□□□ -2.02
CDX1P47902 BNIP3P30-201ENST00000601184 574 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC078795.2-201ENST00000602835 1252 ntBASIC2.43□□□□□ -2.02
CDX1P47902 ATP1B3P1-201ENST00000605365 821 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AC069294.1-201ENST00000608397 350 ntBASIC2.43□□□□□ -2.02
CDX1P47902 Z82243.1-201ENST00000609432 473 ntBASIC2.43□□□□□ -2.02
CDX1P47902 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.43□□□□□ -2.02
CDX1P47902 AC022418.1-201ENST00000624118 445 ntBASIC2.43□□□□□ -2.02
CDX1P47902 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX1P47902 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX1P47902 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDX1P47902 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX1P47902 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.42□□□□□ -2.02
CDX1P47902 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX1P47902 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDX1P47902 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
CDX1P47902 RNU6-1322P-201ENST00000364309 107 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms