Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC105185.1-201ENST00000518705 535 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC009902.1-201ENST00000519351 183 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFSF9P41273 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFSF9P41273 GNAI2P1-201ENST00000541815 315 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC023050.2-201ENST00000544968 387 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 RPS3AP4-201ENST00000555161 764 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AL356432.3-201ENST00000568952 465 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 MIR4999-201ENST00000585029 91 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC023043.2-201ENST00000589678 1026 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC108747.1-201ENST00000609508 535 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
TNFSF9P41273 AC091953.2-201ENST00000623979 160 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
TNFSF9P41273 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.86□□□□□ -2.11
TNFSF9P41273 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TNFSF9P41273 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
TNFSF9P41273 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 Y_RNA.97-201ENST00000363094 102 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 RNU6-931P-201ENST00000363850 107 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 RNY3P13-201ENST00000365542 102 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 RNU4-52P-201ENST00000384209 138 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 RNU6-817P-201ENST00000391083 104 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 EDDM3CP-201ENST00000415977 425 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AIMP1P2-201ENST00000425294 312 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 IPO7P1-201ENST00000442031 636 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 GPM6BP3-201ENST00000442797 145 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 GDI2P2-201ENST00000445131 608 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 SNORA31.19-201ENST00000517079 126 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC084851.1-201ENST00000529105 249 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.85□□□□□ -2.11
TNFSF9P41273 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.85□□□□□ -2.11
TNFSF9P41273 AC104581.2-201ENST00000572227 430 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC234772.3-201ENST00000602277 528 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.6-201ENST00000603753 252 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.11-201ENST00000604059 253 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC008162.1-201ENST00000604718 254 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.1-201ENST00000604752 252 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.5-201ENST00000605253 252 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.12-201ENST00000605291 253 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.8-201ENST00000605353 252 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AL670379.7-201ENST00000605823 252 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC022202.1-201ENST00000613515 211 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 AC108479.2-201ENST00000617314 601 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.85□□□□□ -2.11
TNFSF9P41273 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TNFSF9P41273 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TNFSF9P41273 TEX21P-201ENST00000447107 1476 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 RNU4-28P-201ENST00000364739 141 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 MIR301A-201ENST00000385261 86 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.84□□□□□ -2.11
TNFSF9P41273 RPL23AP36-201ENST00000413895 458 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.84□□□□□ -2.11
TNFSF9P41273 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.84□□□□□ -2.11
TNFSF9P41273 AL022400.1-201ENST00000423946 935 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.84□□□□□ -2.11
TNFSF9P41273 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.84□□□□□ -2.11
TNFSF9P41273 AL161788.1-201ENST00000441805 169 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TNFSF9P41273 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.84□□□□□ -2.11
TNFSF9P41273 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.84□□□□□ -2.11
TNFSF9P41273 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TNFSF9P41273 AC107032.1-201ENST00000485945 480 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AC018437.1-201ENST00000492214 406 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 SNORA4.4-201ENST00000515921 135 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 RNU6-678P-201ENST00000516832 109 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 RNU2-19P-201ENST00000517288 84 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 MTATP6P15-201ENST00000527233 835 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AC079598.5-201ENST00000547460 117 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AC090888.2-201ENST00000559765 1144 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AL354943.1-201ENST00000572103 781 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.84□□□□□ -2.11
TNFSF9P41273 MIR3146-201ENST00000580367 79 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 AC021755.4-201ENST00000616620 456 ntBASIC1.84□□□□□ -2.11
TNFSF9P41273 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.84□□□□□ -2.11
TNFSF9P41273 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.84□□□□□ -2.12
TNFSF9P41273 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TNFSF9P41273 AC138393.1-203ENST00000327086 343 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 RNU1-72P-201ENST00000362976 153 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 Y_RNA.164-201ENST00000363709 102 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 RNU6-457P-201ENST00000363999 107 ntBASIC1.83□□□□□ -2.12
TNFSF9P41273 Y_RNA.302-201ENST00000364997 102 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms