Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC023510.2-201ENST00000622162 746 ntBASIC2.26□□□□□ -2.05
RFC4P35249 AP003400.5-201ENST00000624827 617 ntBASIC2.26□□□□□ -2.05
RFC4P35249 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFC4P35249 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFC4P35249 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFC4P35249 RNU6-500P-201ENST00000362349 107 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNY4P24-201ENST00000362735 96 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU5F-6P-201ENST00000362979 116 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU6-486P-201ENST00000363116 107 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU6-778P-201ENST00000363269 103 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU6-288P-201ENST00000363690 104 ntBASIC2.25□□□□□ -2.05
RFC4P35249 U6atac.2-201ENST00000408644 118 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU2-36P-201ENST00000410361 191 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU2-68P-201ENST00000410878 191 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RPL26P27-201ENST00000414397 437 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RPS3AP44-201ENST00000425466 790 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.25□□□□□ -2.05
RFC4P35249 WARS2P1-201ENST00000429678 537 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.25□□□□□ -2.05
RFC4P35249 AL512286.1-201ENST00000439244 400 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC016691.1-201ENST00000441321 413 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.25□□□□□ -2.05
RFC4P35249 ZNF114P1-201ENST00000453500 292 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.25□□□□□ -2.05
RFC4P35249 AC140059.1-201ENST00000489238 361 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
RFC4P35249 MTCYBP35-201ENST00000503630 1137 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNA5SP112-201ENST00000515937 99 ntBASIC2.25□□□□□ -2.05
RFC4P35249 SNORA31.3-201ENST00000516029 96 ntBASIC2.25□□□□□ -2.05
RFC4P35249 MIR514B-201ENST00000516774 80 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RNU6-201P-201ENST00000517100 61 ntBASIC2.25□□□□□ -2.05
RFC4P35249 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
RFC4P35249 AC022616.6-201ENST00000520479 119 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.25□□□□□ -2.05
RFC4P35249 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RFC4P35249 AC118273.2-201ENST00000532092 465 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.25□□□□□ -2.05
RFC4P35249 RPS3AP4-201ENST00000555161 764 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.25□□□□□ -2.05
RFC4P35249 MIR4255-201ENST00000579351 72 ntBASIC2.25□□□□□ -2.05
RFC4P35249 MIR3118-1-201ENST00000581787 76 ntBASIC2.25□□□□□ -2.05
RFC4P35249 uc_338.14-201ENST00000613162 166 ntBASIC2.25□□□□□ -2.05
RFC4P35249 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.25□□□□□ -2.05
RFC4P35249 U2.21-201ENST00000637295 81 ntBASIC2.25□□□□□ -2.05
RFC4P35249 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
RFC4P35249 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC4P35249 RNU6-501P-201ENST00000364072 100 ntBASIC2.24□□□□□ -2.05
RFC4P35249 RNU6-533P-201ENST00000384144 107 ntBASIC2.24□□□□□ -2.05
RFC4P35249 MIR17-201ENST00000385012 84 ntBASIC2.24□□□□□ -2.05
RFC4P35249 MIR147B-201ENST00000390185 80 ntBASIC2.24□□□□□ -2.05
RFC4P35249 CIR1P3-201ENST00000405137 479 ntBASIC2.24□□□□□ -2.05
RFC4P35249 RPL17P12-201ENST00000413391 526 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC4P35249 AL353777.1-201ENST00000425552 326 ntBASIC2.24□□□□□ -2.05
RFC4P35249 RPL30P4-201ENST00000429309 333 ntBASIC2.24□□□□□ -2.05
RFC4P35249 RPL36AP53-201ENST00000432891 316 ntBASIC2.24□□□□□ -2.05
RFC4P35249 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.24□□□□□ -2.05
RFC4P35249 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.24□□□□□ -2.05
RFC4P35249 MTND4P25-201ENST00000441039 533 ntBASIC2.24□□□□□ -2.05
RFC4P35249 NEFMP1-201ENST00000443423 1006 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AL031659.1-201ENST00000447075 539 ntBASIC2.24□□□□□ -2.05
RFC4P35249 EPS15P1-201ENST00000448836 336 ntBASIC2.24□□□□□ -2.05
RFC4P35249 FABP5P15-201ENST00000453566 214 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC4P35249 RNU7-125P-201ENST00000458760 62 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC068781.1-201ENST00000488231 618 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC008526.1-201ENST00000509149 338 ntBASIC2.24□□□□□ -2.05
RFC4P35249 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.24□□□□□ -2.05
RFC4P35249 RNU6-1129P-201ENST00000515964 104 ntBASIC2.24□□□□□ -2.05
RFC4P35249 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RFC4P35249 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RFC4P35249 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RFC4P35249 AC007375.1-201ENST00000554513 578 ntBASIC2.24□□□□□ -2.05
RFC4P35249 PCMTD1P2-201ENST00000565017 355 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
RFC4P35249 MIR3167-201ENST00000579623 85 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC007363.1-201ENST00000604736 620 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AL512598.1-201ENST00000610158 273 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC027807.2-201ENST00000616099 408 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC009159.2-201ENST00000617603 606 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AL589994.2-201ENST00000621124 579 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AC131159.1-201ENST00000621854 213 ntBASIC2.24□□□□□ -2.05
RFC4P35249 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.24□□□□□ -2.05
RFC4P35249 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.24□□□□□ -2.05
RFC4P35249 AL359854.1-201ENST00000614203 1594 ntBASIC2.23□□□□□ -2.05
RFC4P35249 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.23□□□□□ -2.05
RFC4P35249 RNU2-63P-201ENST00000410792 194 ntBASIC2.23□□□□□ -2.05
RFC4P35249 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
RFC4P35249 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.23□□□□□ -2.05
RFC4P35249 AL645568.3-201ENST00000433683 316 ntBASIC2.23□□□□□ -2.05
RFC4P35249 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.23□□□□□ -2.05
RFC4P35249 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.23□□□□□ -2.05
RFC4P35249 SSXP1-201ENST00000453640 473 ntBASIC2.23□□□□□ -2.05
RFC4P35249 SNRPGP9-201ENST00000456025 225 ntBASIC2.23□□□□□ -2.05
RFC4P35249 RNU7-95P-201ENST00000459222 64 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.23□□□□□ -2.05
RFC4P35249 AC087441.2-201ENST00000529141 262 ntBASIC2.23□□□□□ -2.05
RFC4P35249 MRPS36P5-201ENST00000551909 298 ntBASIC2.23□□□□□ -2.05
RFC4P35249 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms