Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MIR3921-201ENST00000577308 85 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
CLIP1P30622 MIR4765-201ENST00000585007 77 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC105224.1-201ENST00000587055 421 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 BNIP3P16-201ENST00000589779 534 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 MTCO2P2-201ENST00000591258 225 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC024581.2-201ENST00000619986 252 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 RNU1-23P-201ENST00000363361 144 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 SNORA25B-201ENST00000365507 128 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 MRPS36P1-201ENST00000421291 307 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AL160275.3-201ENST00000423876 471 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC004854.1-201ENST00000440356 349 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 TRBVB-201ENST00000477100 408 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.38□□□□□ -2.35
CLIP1P30622 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CLIP1P30622 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.38□□□□□ -2.35
CLIP1P30622 AC010615.3-201ENST00000597319 394 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC007349.4-201ENST00000608114 532 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC087588.2-201ENST00000617667 426 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CLIP1P30622 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.37□□□□□ -2.35
CLIP1P30622 MIR608-201ENST00000384820 100 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 RNA5SP501-201ENST00000410990 112 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.37□□□□□ -2.35
CLIP1P30622 AC092757.1-201ENST00000467293 467 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 TRBVA-201ENST00000498804 316 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.37□□□□□ -2.35
CLIP1P30622 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.37□□□□□ -2.35
CLIP1P30622 AC012414.6-201ENST00000568241 401 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 AC007490.1-201ENST00000624321 703 ntBASIC0.37□□□□□ -2.35
CLIP1P30622 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.36□□□□□ -2.35
CLIP1P30622 MED14P1-201ENST00000430517 648 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 FABP5P14-201ENST00000437273 393 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 AC104073.1-201ENST00000451988 151 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.36□□□□□ -2.35
CLIP1P30622 RPS20P24-201ENST00000457473 361 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 BET1P1-201ENST00000482276 359 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 AC018868.1-201ENST00000491307 315 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.36□□□□□ -2.35
CLIP1P30622 AL590705.4-201ENST00000532209 134 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.36□□□□□ -2.35
CLIP1P30622 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 AC099654.5-201ENST00000636479 350 ntBASIC0.36□□□□□ -2.35
CLIP1P30622 MTND5P30-201ENST00000452896 1731 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
CLIP1P30622 Y_RNA.518-201ENST00000384552 113 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 MIR597-201ENST00000384968 97 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 TAF9BP2-201ENST00000400856 499 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC096649.2-201ENST00000416186 393 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 MTCO2P20-201ENST00000437339 673 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC104629.2-201ENST00000468627 598 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 RNU6-202P-201ENST00000515998 96 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 SNORA31.22-201ENST00000517204 135 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.35□□□□□ -2.35
CLIP1P30622 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
CLIP1P30622 AL049870.4-201ENST00000555741 486 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC023158.1-201ENST00000561632 1025 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC002400.1-201ENST00000569310 726 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 MIR5589-201ENST00000579442 60 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC008088.1-201ENST00000580993 280 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC073544.2-201ENST00000601155 540 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC126177.8-201ENST00000618339 1015 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 AC007792.1-201ENST00000623023 402 ntBASIC0.35□□□□□ -2.35
CLIP1P30622 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.34□□□□□ -2.35
CLIP1P30622 RNA5SP240-201ENST00000365355 128 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 RNU11-3P-201ENST00000391111 133 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 RPL21P24-201ENST00000413752 448 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
CLIP1P30622 RPS25P9-201ENST00000435591 252 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 RPL31P3-201ENST00000458430 332 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.34□□□□□ -2.36
CLIP1P30622 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.34□□□□□ -2.36
CLIP1P30622 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 MIR4802-201ENST00000581881 80 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 AL391813.1-201ENST00000603098 260 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 AL137246.1-201ENST00000607072 977 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 AL138726.1-201ENST00000614873 333 ntBASIC0.34□□□□□ -2.36
CLIP1P30622 HMGB1P17-201ENST00000403495 628 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 MIR1290-201ENST00000408735 78 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.33□□□□□ -2.36
CLIP1P30622 FCF1P6-201ENST00000456841 595 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 AP1S2P1-201ENST00000457344 379 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 SMURF2P1-201ENST00000514992 481 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 CYB5AP5-201ENST00000549779 389 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.33□□□□□ -2.36
CLIP1P30622 FAM60CP-201ENST00000591086 664 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 AL359314.1-201ENST00000616913 261 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 AC073569.3-201ENST00000619055 682 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 AL627230.5-201ENST00000619807 58 ntBASIC0.33□□□□□ -2.36
CLIP1P30622 SNRPEP3-201ENST00000338402 276 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 RNU6-217P-201ENST00000384164 104 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CLIP1P30622 MIR1265-201ENST00000408444 86 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 NANOGP2-201ENST00000435391 727 ntBASIC0.32□□□□□ -2.36
CLIP1P30622 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms