Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 SNORA38-201ENST00000363946 132 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.44□□□□□ -2.18
COL5A3P25940 RNU6-114P-201ENST00000384704 105 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 RNU6-754P-201ENST00000391166 107 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A3P25940 USP9YP13-201ENST00000417797 480 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 ZNF90P2-204ENST00000419323 1075 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AL022400.1-201ENST00000423946 935 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A3P25940 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.44□□□□□ -2.18
COL5A3P25940 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.44□□□□□ -2.18
COL5A3P25940 AC092573.2-201ENST00000434546 243 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 SNRPEP7-201ENST00000438350 220 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AL512286.1-201ENST00000439244 400 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 MTCO1P27-201ENST00000448269 226 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AC098826.2-201ENST00000452011 651 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 OR6C5P-201ENST00000452388 923 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 snoU13.8-201ENST00000458890 104 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.44□□□□□ -2.18
COL5A3P25940 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.44□□□□□ -2.18
COL5A3P25940 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A3P25940 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.44□□□□□ -2.18
COL5A3P25940 Y_RNA.717-201ENST00000517106 92 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AC087854.1-201ENST00000519706 414 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A3P25940 LRRC34P1-201ENST00000542742 915 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A3P25940 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.44□□□□□ -2.18
COL5A3P25940 AC009094.1-201ENST00000564443 426 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AC012435.1-202ENST00000568772 240 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AC090615.1-201ENST00000577519 154 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 MIR544B-201ENST00000582372 78 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.44□□□□□ -2.18
COL5A3P25940 AC004853.1-201ENST00000604902 698 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AC105129.3-201ENST00000605455 485 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 AP000676.3-201ENST00000623299 569 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL5A3P25940 AC005832.2-201ENST00000538921 1430 ntBASIC1.44□□□□□ -2.18
COL5A3P25940 RNU6-37P-201ENST00000362692 107 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-11P-201ENST00000364234 107 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-343P-201ENST00000364709 104 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNU1-133P-201ENST00000364867 167 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-878P-201ENST00000384578 110 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 MIR767-201ENST00000390228 109 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL5A3P25940 MIR1284-201ENST00000408337 120 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 MIR1290-201ENST00000408735 78 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A3P25940 MTCO1P17-201ENST00000411522 491 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL356379.1-201ENST00000414105 126 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL365496.1-201ENST00000426885 215 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RPS25P9-201ENST00000435591 252 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 AL445687.1-201ENST00000439946 251 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 RNA5SP216-201ENST00000516111 123 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-528P-201ENST00000516926 100 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A3P25940 AP003497.1-201ENST00000528472 562 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A3P25940 AL121821.2-201ENST00000556081 394 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 CYCSP2-201ENST00000558168 301 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 ROCK1P1-201ENST00000573767 549 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RN7SL793P-201ENST00000583259 296 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AP001429.1-201ENST00000602568 530 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 Z99497.2-201ENST00000603634 310 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC011451.2-201ENST00000604303 598 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC072039.2-201ENST00000608883 439 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL596245.1-201ENST00000618994 362 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC131159.1-201ENST00000621854 213 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC091931.1-201ENST00000623488 728 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL159972.1-201ENST00000625150 448 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 PCMTD1P7-201ENST00000634506 357 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC007671.2-201ENST00000637344 619 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 OR5H6-203ENST00000642105 978 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-621P-201ENST00000364752 109 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 SNORA18.2-201ENST00000383865 132 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNY1P4-201ENST00000384595 115 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 MIR135A2-201ENST00000384854 100 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.43□□□□□ -2.18
COL5A3P25940 TXNL1P1-201ENST00000429528 554 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A3P25940 RPL37P21-201ENST00000435890 276 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL117351.1-201ENST00000438864 766 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.43□□□□□ -2.18
COL5A3P25940 RPL23AP35-201ENST00000451906 501 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.43□□□□□ -2.18
COL5A3P25940 RPL30P12-201ENST00000474666 353 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 AC105252.1-201ENST00000503089 286 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-1129P-201ENST00000515964 104 ntBASIC1.43□□□□□ -2.18
COL5A3P25940 RNU6-405P-201ENST00000516637 110 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms