Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USF1P22415 GDI2P2-201ENST00000445131 608 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC007677.1-201ENST00000445757 515 ntBASIC1.73□□□□□ -2.13
USF1P22415 SSXP1-201ENST00000453640 473 ntBASIC1.73□□□□□ -2.13
USF1P22415 MTND1P12-201ENST00000455231 147 ntBASIC1.73□□□□□ -2.13
USF1P22415 RNU6-717P-201ENST00000459076 104 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.73□□□□□ -2.13
USF1P22415 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.73□□□□□ -2.13
USF1P22415 RNU1-40P-201ENST00000516816 164 ntBASIC1.73□□□□□ -2.13
USF1P22415 RNU1-97P-201ENST00000516872 164 ntBASIC1.73□□□□□ -2.13
USF1P22415 SCARNA1-201ENST00000517138 166 ntBASIC1.73□□□□□ -2.13
USF1P22415 RNU2-19P-201ENST00000517288 84 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC022616.6-201ENST00000520479 119 ntBASIC1.73□□□□□ -2.13
USF1P22415 FAM92A1P1-201ENST00000528023 890 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.73□□□□□ -2.13
USF1P22415 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.73□□□□□ -2.13
USF1P22415 MIR4529-201ENST00000578110 78 ntBASIC1.73□□□□□ -2.13
USF1P22415 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.73□□□□□ -2.13
USF1P22415 AC007229.1-201ENST00000590455 412 ntBASIC1.73□□□□□ -2.13
USF1P22415 AP000811.1-201ENST00000603803 651 ntBASIC1.73□□□□□ -2.13
USF1P22415 MIR15A-201ENST00000607334 83 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC092953.2-201ENST00000608000 699 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.73□□□□□ -2.13
USF1P22415 AC017037.3-201ENST00000625016 472 ntBASIC1.73□□□□□ -2.13
USF1P22415 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
USF1P22415 SNORD113-6-201ENST00000363345 75 ntBASIC1.72□□□□□ -2.13
USF1P22415 RNU6-660P-201ENST00000364566 109 ntBASIC1.72□□□□□ -2.13
USF1P22415 RNA5SP138-201ENST00000365098 114 ntBASIC1.72□□□□□ -2.13
USF1P22415 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USF1P22415 RNU6-809P-201ENST00000384461 107 ntBASIC1.72□□□□□ -2.13
USF1P22415 MIR561-201ENST00000385216 97 ntBASIC1.72□□□□□ -2.13
USF1P22415 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USF1P22415 FTH1P15-201ENST00000406984 280 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC009518.2-201ENST00000418056 731 ntBASIC1.72□□□□□ -2.13
USF1P22415 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 AL354941.1-201ENST00000438600 464 ntBASIC1.72□□□□□ -2.13
USF1P22415 AL008629.1-201ENST00000438615 184 ntBASIC1.72□□□□□ -2.13
USF1P22415 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.72□□□□□ -2.13
USF1P22415 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.72□□□□□ -2.13
USF1P22415 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.72□□□□□ -2.13
USF1P22415 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC107032.1-201ENST00000485945 480 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.72□□□□□ -2.13
USF1P22415 RNA5SP137-201ENST00000516833 135 ntBASIC1.72□□□□□ -2.13
USF1P22415 SNORA48.11-201ENST00000517015 89 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 OR5AQ1P-201ENST00000527596 927 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.72□□□□□ -2.13
USF1P22415 ANP32BP3-201ENST00000559213 706 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.72□□□□□ -2.13
USF1P22415 MIR3118-1-201ENST00000581787 76 ntBASIC1.72□□□□□ -2.13
USF1P22415 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.72□□□□□ -2.13
USF1P22415 AL713866.2-201ENST00000603579 219 ntBASIC1.72□□□□□ -2.13
USF1P22415 AL355816.2-201ENST00000610049 647 ntBASIC1.72□□□□□ -2.13
USF1P22415 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USF1P22415 AC008121.3-201ENST00000618726 433 ntBASIC1.72□□□□□ -2.13
USF1P22415 AL078595.3-201ENST00000623815 1166 ntBASIC1.72□□□□□ -2.13
USF1P22415 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USF1P22415 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USF1P22415 SNORD114-19-201ENST00000363072 75 ntBASIC1.71□□□□□ -2.14
USF1P22415 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.71□□□□□ -2.14
USF1P22415 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.71□□□□□ -2.14
USF1P22415 RNU6-584P-201ENST00000410350 95 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC092809.3-201ENST00000415453 231 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.71□□□□□ -2.14
USF1P22415 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.71□□□□□ -2.14
USF1P22415 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.71□□□□□ -2.14
USF1P22415 AL118520.1-201ENST00000450770 291 ntBASIC1.71□□□□□ -2.14
USF1P22415 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.71□□□□□ -2.14
USF1P22415 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.71□□□□□ -2.14
USF1P22415 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.71□□□□□ -2.14
USF1P22415 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.71□□□□□ -2.14
USF1P22415 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
USF1P22415 Y_RNA.689-201ENST00000516589 107 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.71□□□□□ -2.14
USF1P22415 AL354943.1-201ENST00000572103 781 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.71□□□□□ -2.14
USF1P22415 MIR4448-201ENST00000584360 86 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC018714.1-201ENST00000605028 208 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.71□□□□□ -2.14
USF1P22415 AC091953.2-201ENST00000623979 160 ntBASIC1.71□□□□□ -2.14
USF1P22415 AC092656.1-203ENST00000624134 423 ntBASIC1.71□□□□□ -2.14
USF1P22415 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.71□□□□□ -2.14
USF1P22415 AL445523.1-201ENST00000451184 1362 ntBASIC1.71□□□□□ -2.14
USF1P22415 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USF1P22415 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USF1P22415 SNORD115.1-201ENST00000391109 76 ntBASIC1.7□□□□□ -2.14
USF1P22415 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
USF1P22415 AIMP1P2-201ENST00000425294 312 ntBASIC1.7□□□□□ -2.14
USF1P22415 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.7□□□□□ -2.14
USF1P22415 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.7□□□□□ -2.14
USF1P22415 AC118469.1-201ENST00000442943 488 ntBASIC1.7□□□□□ -2.14
USF1P22415 AL606662.1-201ENST00000445763 553 ntBASIC1.7□□□□□ -2.14
USF1P22415 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.7□□□□□ -2.14
USF1P22415 AC007182.2-201ENST00000489251 402 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms