Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 RPS15AP11-201ENST00000594193 385 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC121247.2-201ENST00000604776 136 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC010678.1-201ENST00000614118 713 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
XRCC1P18887 AC078883.4-201ENST00000623218 367 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
XRCC1P18887 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
XRCC1P18887 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
XRCC1P18887 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 Y_RNA.22-201ENST00000362492 102 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 RNU6-486P-201ENST00000363116 107 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 SNORA24.1-201ENST00000384401 135 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 MIR518D-201ENST00000385014 87 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
XRCC1P18887 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 U6atac.2-201ENST00000408644 118 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 RN7SKP284-201ENST00000411002 343 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.2□□□□□ -2.06
XRCC1P18887 MORF4L1P6-201ENST00000418771 268 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AL160275.3-201ENST00000423876 471 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.2□□□□□ -2.06
XRCC1P18887 CALM2P2-201ENST00000428512 440 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 NDUFB1P2-201ENST00000449477 176 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 GAPDHP17-201ENST00000449858 1001 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 BET1P1-201ENST00000482276 359 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.2□□□□□ -2.06
XRCC1P18887 ACA59.2-201ENST00000517061 156 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.2□□□□□ -2.06
XRCC1P18887 AC026407.1-201ENST00000518369 204 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.2□□□□□ -2.06
XRCC1P18887 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.2□□□□□ -2.06
XRCC1P18887 OR5AQ1P-201ENST00000527596 927 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC007834.2-201ENST00000536310 343 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.2□□□□□ -2.06
XRCC1P18887 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.2□□□□□ -2.06
XRCC1P18887 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.2□□□□□ -2.06
XRCC1P18887 AC023824.2-201ENST00000566185 400 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC137800.2-201ENST00000574375 120 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC008088.1-201ENST00000580993 280 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
XRCC1P18887 AC008121.1-201ENST00000603244 268 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC090578.1-201ENST00000604955 591 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AL158032.1-201ENST00000605401 106 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 RNU6-91P-201ENST00000607774 107 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.2□□□□□ -2.06
XRCC1P18887 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC087241.4-201ENST00000612441 480 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 U6.42-201ENST00000618440 107 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.2□□□□□ -2.06
XRCC1P18887 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
XRCC1P18887 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
XRCC1P18887 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
XRCC1P18887 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 RNU6-179P-201ENST00000363350 107 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 RNU6-898P-201ENST00000365627 104 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 SNORD116-8-201ENST00000384365 95 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 BX276092.3-201ENST00000424182 230 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.19□□□□□ -2.06
XRCC1P18887 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 AL139109.1-201ENST00000455491 297 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.19□□□□□ -2.06
XRCC1P18887 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 AL121769.1-201ENST00000469473 401 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AC116562.3-201ENST00000506136 177 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 SCARNA24.1-201ENST00000516465 137 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 RNU6-410P-201ENST00000517006 107 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 FAM92A1P1-201ENST00000528023 890 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AC068587.5-201ENST00000528506 175 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 AC009127.3-201ENST00000570531 403 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 MIR3199-1-201ENST00000582434 88 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 MIR4658-201ENST00000584344 65 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AL021997.1-201ENST00000605757 193 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AC116312.1-201ENST00000606841 314 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AC069294.1-201ENST00000608397 350 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
XRCC1P18887 AC110994.2-201ENST00000635481 492 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 MTND5P17-201ENST00000418405 1603 ntBASIC2.19□□□□□ -2.06
XRCC1P18887 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
XRCC1P18887 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
XRCC1P18887 AC138393.1-203ENST00000327086 343 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 U3.4-201ENST00000363352 213 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 RNU6-61P-201ENST00000365528 109 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 SNORA51.11-201ENST00000384442 131 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 MIR221-201ENST00000385135 110 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 MIR1302-8-201ENST00000408342 128 ntBASIC2.18□□□□□ -2.06
XRCC1P18887 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
XRCC1P18887 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.18□□□□□ -2.06
XRCC1P18887 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms