Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.474-201ENST00000384341 102 ntBASIC2.96□□□□□ -1.94
LDLRP01130 MIR454-201ENST00000390180 115 ntBASIC2.96□□□□□ -1.94
LDLRP01130 RNU6-817P-201ENST00000391083 104 ntBASIC2.96□□□□□ -1.94
LDLRP01130 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LDLRP01130 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LDLRP01130 ATG3P1-201ENST00000419507 911 ntBASIC2.96□□□□□ -1.94
LDLRP01130 OOSP1P1-201ENST00000423265 274 ntBASIC2.96□□□□□ -1.94
LDLRP01130 AC104332.2-201ENST00000429959 156 ntBASIC2.96□□□□□ -1.94
LDLRP01130 NDUFA5P4-201ENST00000436704 385 ntBASIC2.96□□□□□ -1.94
LDLRP01130 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.96□□□□□ -1.94
LDLRP01130 RPL32P28-201ENST00000443577 397 ntBASIC2.96□□□□□ -1.94
LDLRP01130 DDX3P2-201ENST00000446138 111 ntBASIC2.96□□□□□ -1.94
LDLRP01130 MTND4P19-201ENST00000446659 478 ntBASIC2.96□□□□□ -1.94
LDLRP01130 AL590664.1-201ENST00000448065 339 ntBASIC2.96□□□□□ -1.94
LDLRP01130 CECR9-201ENST00000453421 199 ntBASIC2.96□□□□□ -1.94
LDLRP01130 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.96□□□□□ -1.94
LDLRP01130 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.96□□□□□ -1.94
LDLRP01130 SCOCP1-201ENST00000554676 349 ntBASIC2.96□□□□□ -1.94
LDLRP01130 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.96□□□□□ -1.94
LDLRP01130 HMGB1P6-201ENST00000569046 646 ntBASIC2.96□□□□□ -1.94
LDLRP01130 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.96□□□□□ -1.94
LDLRP01130 HSPE1P7-201ENST00000604681 321 ntBASIC2.96□□□□□ -1.94
LDLRP01130 AL133255.1-201ENST00000606374 441 ntBASIC2.96□□□□□ -1.94
LDLRP01130 ATP5A1P2-202ENST00000616464 443 ntBASIC2.96□□□□□ -1.94
LDLRP01130 AC009248.2-201ENST00000619826 254 ntBASIC2.96□□□□□ -1.94
LDLRP01130 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.96□□□□□ -1.94
LDLRP01130 AC006020.1-201ENST00000420179 1854 ntBASIC2.96□□□□□ -1.94
LDLRP01130 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LDLRP01130 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
LDLRP01130 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LDLRP01130 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
LDLRP01130 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.95□□□□□ -1.94
LDLRP01130 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.95□□□□□ -1.94
LDLRP01130 RNU6-799P-201ENST00000363567 107 ntBASIC2.95□□□□□ -1.94
LDLRP01130 Y_RNA.184-201ENST00000363884 108 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNU4-48P-201ENST00000365559 182 ntBASIC2.95□□□□□ -1.94
LDLRP01130 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 SNORA1.3-201ENST00000384676 136 ntBASIC2.95□□□□□ -1.94
LDLRP01130 Y_RNA.576-201ENST00000384781 102 ntBASIC2.95□□□□□ -1.94
LDLRP01130 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LDLRP01130 RN7SKP32-201ENST00000410167 303 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNU6-373P-201ENST00000411247 98 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNA5SP111-201ENST00000411386 101 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 AC093151.1-201ENST00000427711 313 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL592045.1-201ENST00000429867 352 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.95□□□□□ -1.94
LDLRP01130 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 GPM6BP2-201ENST00000432046 144 ntBASIC2.95□□□□□ -1.94
LDLRP01130 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.95□□□□□ -1.94
LDLRP01130 RPL36AP6-201ENST00000435770 321 ntBASIC2.95□□□□□ -1.94
LDLRP01130 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 GPM6BP1-201ENST00000446387 144 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL162395.1-201ENST00000457882 422 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNU7-182P-201ENST00000459009 62 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RPS29P12-201ENST00000460178 152 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
LDLRP01130 EIF4EP3-201ENST00000498782 656 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 SNORD27.1-201ENST00000516319 72 ntBASIC2.95□□□□□ -1.94
LDLRP01130 RNU6-1282P-201ENST00000516735 96 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.95□□□□□ -1.94
LDLRP01130 AP005597.4-201ENST00000526762 229 ntBASIC2.95□□□□□ -1.94
LDLRP01130 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 MIR3162-201ENST00000581818 82 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL162713.1-201ENST00000604480 262 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL670379.4-201ENST00000605279 254 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL162730.1-201ENST00000605734 292 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AC012409.4-201ENST00000612923 249 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AL354950.2-201ENST00000617939 290 ntBASIC2.95□□□□□ -1.94
LDLRP01130 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.95□□□□□ -1.94
LDLRP01130 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.95□□□□□ -1.94
LDLRP01130 TPTEP1-208ENST00000636884 213 ntBASIC2.95□□□□□ -1.94
LDLRP01130 MIR1302-1-201ENST00000637932 143 ntBASIC2.95□□□□□ -1.94
LDLRP01130 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LDLRP01130 MTND4P35-201ENST00000604257 1375 ntBASIC2.95□□□□□ -1.94
LDLRP01130 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LDLRP01130 AC091564.4-201ENST00000533934 2194 ntBASIC2.95□□□□□ -1.94
LDLRP01130 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LDLRP01130 FAM35BP-202ENST00000497389 3337 ntBASIC2.94□□□□□ -1.94
LDLRP01130 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.94□□□□□ -1.94
LDLRP01130 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LDLRP01130 SNORD115-7-201ENST00000365306 82 ntBASIC2.94□□□□□ -1.94
LDLRP01130 RNU6-140P-201ENST00000384566 108 ntBASIC2.94□□□□□ -1.94
LDLRP01130 CISD1P1-201ENST00000393907 327 ntBASIC2.94□□□□□ -1.94
LDLRP01130 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LDLRP01130 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.94□□□□□ -1.94
LDLRP01130 MTND2P23-201ENST00000422990 651 ntBASIC2.94□□□□□ -1.94
LDLRP01130 MTCO2P12-201ENST00000427426 682 ntBASIC2.94□□□□□ -1.94
LDLRP01130 SAR1AP4-201ENST00000429225 591 ntBASIC2.94□□□□□ -1.94
LDLRP01130 AL365400.1-201ENST00000431854 640 ntBASIC2.94□□□□□ -1.94
LDLRP01130 RPL23AP58-201ENST00000440453 469 ntBASIC2.94□□□□□ -1.94
LDLRP01130 RPL7P12-201ENST00000446719 750 ntBASIC2.94□□□□□ -1.94
LDLRP01130 RN7SL863P-201ENST00000462370 296 ntBASIC2.94□□□□□ -1.94
LDLRP01130 AC104806.1-201ENST00000508720 308 ntBASIC2.94□□□□□ -1.94
LDLRP01130 SNORD60.2-201ENST00000516883 86 ntBASIC2.94□□□□□ -1.94
LDLRP01130 RNU6-143P-201ENST00000516942 93 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms