Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SNORD51.1-201ENST00000365405 77 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 RNU6-1235P-201ENST00000384559 107 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA1O95477 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.67□□□□□ -2.3
ABCA1O95477 TOMM22P2-201ENST00000430735 237 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA1O95477 RNU6-498P-201ENST00000459468 107 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 RPL22P13-201ENST00000493291 347 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC104806.1-201ENST00000508720 308 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC005951.2-201ENST00000576282 495 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 MIR4422-201ENST00000581938 83 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA1O95477 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA1O95477 AC010900.2-201ENST00000604508 210 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AL158211.4-201ENST00000606988 584 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC092953.2-201ENST00000608000 699 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA1O95477 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA1O95477 RNU6-1005P-201ENST00000384519 107 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 MIR1283-2-201ENST00000408621 87 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA1O95477 MTCYBP32-201ENST00000427945 1084 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.67□□□□□ -2.3
ABCA1O95477 RNU11-2P-201ENST00000516898 142 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 SNORA48.11-201ENST00000517015 89 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA1O95477 AC133794.1-201ENST00000602731 914 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.67□□□□□ -2.3
ABCA1O95477 AC243829.6-201ENST00000612652 106 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AL627230.5-201ENST00000619807 58 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC024581.2-201ENST00000619986 252 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC138627.2-201ENST00000624202 601 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 AC004808.1-201ENST00000627671 721 ntBASIC0.67□□□□□ -2.3
ABCA1O95477 ZNF680P1-201ENST00000436625 1469 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 Y_RNA.60-201ENST00000362831 98 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 RNU6-338P-201ENST00000383888 105 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 RNU6-754P-201ENST00000391166 107 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.66□□□□□ -2.3
ABCA1O95477 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.66□□□□□ -2.3
ABCA1O95477 AL121578.1-201ENST00000428051 892 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.66□□□□□ -2.3
ABCA1O95477 AC002542.1-201ENST00000440683 193 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 MTCYBP11-201ENST00000447254 1109 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.66□□□□□ -2.3
ABCA1O95477 RNU6-581P-201ENST00000516214 105 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AC109329.1-201ENST00000518744 317 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.66□□□□□ -2.3
ABCA1O95477 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.66□□□□□ -2.3
ABCA1O95477 AC022202.1-201ENST00000613515 211 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 MTND5P9-201ENST00000503854 1755 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AL391516.1-201ENST00000554380 2449 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.66□□□□□ -2.3
ABCA1O95477 MTND1P21-201ENST00000412991 285 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AL161788.1-201ENST00000441805 169 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 HMGB1P36-201ENST00000487709 576 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA1O95477 NRON-201ENST00000517270 370 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA1O95477 AL359314.1-201ENST00000616913 261 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 AC080188.3-201ENST00000624842 748 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 Z99571.1-201ENST00000636677 394 ntBASIC0.66□□□□□ -2.3
ABCA1O95477 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
ABCA1O95477 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
ABCA1O95477 RNU6-529P-201ENST00000363383 104 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
ABCA1O95477 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 AL160275.3-201ENST00000423876 471 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 RPS27P16-201ENST00000425758 201 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 PTGES3P4-201ENST00000426243 356 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.65□□□□□ -2.31
ABCA1O95477 ARPC3P5-201ENST00000448802 534 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.65□□□□□ -2.31
ABCA1O95477 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.65□□□□□ -2.31
ABCA1O95477 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.65□□□□□ -2.31
ABCA1O95477 MTCYBP16-201ENST00000509187 1129 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 RNU6-528P-201ENST00000516926 100 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 CYCSP27-201ENST00000527643 293 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 AP003476.1-201ENST00000623984 516 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
ABCA1O95477 AC092125.1-201ENST00000562568 1995 ntBASIC0.65□□□□□ -2.31
ABCA1O95477 ZNF29P-201ENST00000225587 168 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 Y_RNA.412-201ENST00000384001 104 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AL589655.1-201ENST00000405398 482 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 ELOCP14-201ENST00000428070 331 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 ELOCP7-201ENST00000439968 331 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA1O95477 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.64□□□□□ -2.31
ABCA1O95477 AC023824.3-201ENST00000569003 562 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC005668.1-201ENST00000571142 476 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC021646.1-201ENST00000605469 484 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 AC006270.3-201ENST00000605967 1036 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA1O95477 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ABCA1O95477 AL139397.2-201ENST00000404529 772 ntBASIC0.64□□□□□ -2.31
ABCA1O95477 TAF13P2-201ENST00000416876 286 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms