Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 MTND1P37-201ENST00000636562 264 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 AF127577.6-201ENST00000623352 2191 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAPGEF3O95398 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAPGEF3O95398 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RAPGEF3O95398 MIR30E-201ENST00000362104 92 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 Y_RNA.212-201ENST00000364177 102 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 RNU6-371P-201ENST00000364283 108 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 RNU6-512P-201ENST00000364438 103 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 AC002075.2-201ENST00000425207 252 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 AL592045.1-201ENST00000429867 352 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.34□□□□□ -1.71
RAPGEF3O95398 AC009237.8-201ENST00000445492 379 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.34□□□□□ -1.71
RAPGEF3O95398 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.34□□□□□ -1.71
RAPGEF3O95398 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.34□□□□□ -1.71
RAPGEF3O95398 SNORA14.1-201ENST00000516113 141 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 MIR2114-201ENST00000516645 80 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 RNA5SP471-201ENST00000516971 106 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 CYCSP27-201ENST00000527643 293 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAPGEF3O95398 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.34□□□□□ -1.71
RAPGEF3O95398 MIR1273C-201ENST00000578669 77 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 AC106900.2-201ENST00000604994 317 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 AC103710.3-201ENST00000608157 948 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.34□□□□□ -1.71
RAPGEF3O95398 AL512643.1-201ENST00000635735 524 ntBASIC4.34□□□□□ -1.71
RAPGEF3O95398 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAPGEF3O95398 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RAPGEF3O95398 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RAPGEF3O95398 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAPGEF3O95398 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAPGEF3O95398 RNU6-254P-201ENST00000363377 107 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 Y_RNA.184-201ENST00000363884 108 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 SNORA9.2-201ENST00000365361 133 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAPGEF3O95398 DEFB109C-201ENST00000382575 264 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 DEFB109B-201ENST00000382656 264 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 Y_RNA.480-201ENST00000384364 102 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 MIR9-1-201ENST00000385198 89 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 AL138827.1-201ENST00000402666 306 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 AL136097.1-201ENST00000456945 913 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 SNRPGP3-201ENST00000469405 227 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 RNU6-277P-201ENST00000516272 106 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 MIR548AC-201ENST00000585049 88 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 HMGB1P50-201ENST00000605814 607 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 AC103858.2-201ENST00000621471 543 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.33□□□□□ -1.72
RAPGEF3O95398 Z99571.1-201ENST00000636677 394 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 MIR1302-1-201ENST00000637932 143 ntBASIC4.33□□□□□ -1.72
RAPGEF3O95398 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAPGEF3O95398 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAPGEF3O95398 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAPGEF3O95398 Y_RNA.238-201ENST00000364441 102 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 Y_RNA.245-201ENST00000364493 95 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAPGEF3O95398 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.32□□□□□ -1.72
RAPGEF3O95398 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.32□□□□□ -1.72
RAPGEF3O95398 RNU6-991P-201ENST00000516168 107 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 RNU6-1315P-201ENST00000517187 99 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 AP003122.3-201ENST00000526316 255 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 AC107016.2-201ENST00000547968 190 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.32□□□□□ -1.72
RAPGEF3O95398 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.32□□□□□ -1.72
RAPGEF3O95398 AL356055.1-201ENST00000602528 446 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 uc_338.15-201ENST00000615470 191 ntBASIC4.32□□□□□ -1.72
RAPGEF3O95398 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.32□□□□□ -1.72
RAPGEF3O95398 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAPGEF3O95398 RNU4-79P-201ENST00000362764 141 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 SNORA4.3-201ENST00000365564 137 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 Y_RNA.474-201ENST00000384341 102 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 RPL21P90-201ENST00000415692 466 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 GPM6BP2-201ENST00000432046 144 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 IFNA11P-201ENST00000446352 526 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 GPM6BP1-201ENST00000446387 144 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.31□□□□□ -1.72
RAPGEF3O95398 FABP5P15-201ENST00000453566 214 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.31□□□□□ -1.72
RAPGEF3O95398 RNU6-256P-201ENST00000516747 97 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 AC109329.2-201ENST00000519658 482 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 TRAV28-201ENST00000557548 323 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.31□□□□□ -1.72
RAPGEF3O95398 AL355375.2-201ENST00000574825 175 ntBASIC4.31□□□□□ -1.72
RAPGEF3O95398 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms