Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN3O95197 RPL23AP11-201ENST00000475260 469 ntBASIC3.02□□□□□ -1.93
RTN3O95197 RN7SL429P-201ENST00000479090 223 ntBASIC3.02□□□□□ -1.93
RTN3O95197 RN7SL489P-201ENST00000486185 223 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AC011005.2-201ENST00000487324 359 ntBASIC3.02□□□□□ -1.93
RTN3O95197 RN7SL327P-201ENST00000488659 223 ntBASIC3.02□□□□□ -1.93
RTN3O95197 MTAPP1-201ENST00000489154 819 ntBASIC3.02□□□□□ -1.93
RTN3O95197 MTND3P25-201ENST00000509243 135 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.02□□□□□ -1.93
RTN3O95197 COX6CP5-201ENST00000527162 228 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AC004486.1-201ENST00000546846 233 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN3O95197 OR1M4P-201ENST00000589199 287 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AL033523.1-201ENST00000605153 153 ntBASIC3.02□□□□□ -1.93
RTN3O95197 uc_338.14-201ENST00000613162 166 ntBASIC3.02□□□□□ -1.93
RTN3O95197 RN7SL853P-201ENST00000617250 223 ntBASIC3.02□□□□□ -1.93
RTN3O95197 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.02□□□□□ -1.93
RTN3O95197 AL161431.1-201ENST00000618966 4205 ntBASIC3.01□□□□□ -1.93
RTN3O95197 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.01□□□□□ -1.93
RTN3O95197 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RTN3O95197 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
RTN3O95197 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.01□□□□□ -1.93
RTN3O95197 RNU6-384P-201ENST00000364900 104 ntBASIC3.01□□□□□ -1.93
RTN3O95197 RNU6-72P-201ENST00000384285 79 ntBASIC3.01□□□□□ -1.93
RTN3O95197 MIR627-201ENST00000384979 97 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.01□□□□□ -1.93
RTN3O95197 AL669831.1-202ENST00000428504 417 ntBASIC3.01□□□□□ -1.93
RTN3O95197 TIMM9P3-201ENST00000428659 274 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AL589823.1-201ENST00000429577 183 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.01□□□□□ -1.93
RTN3O95197 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.01□□□□□ -1.93
RTN3O95197 GTF2IP13-201ENST00000438487 386 ntBASIC3.01□□□□□ -1.93
RTN3O95197 UBBP3-201ENST00000445497 241 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AC073415.1-201ENST00000449240 153 ntBASIC3.01□□□□□ -1.93
RTN3O95197 PSPHP1-201ENST00000450062 261 ntBASIC3.01□□□□□ -1.93
RTN3O95197 SRRM1P2-201ENST00000464531 1192 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AL163973.1-201ENST00000484753 577 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.01□□□□□ -1.93
RTN3O95197 RNU1-86P-201ENST00000516108 154 ntBASIC3.01□□□□□ -1.93
RTN3O95197 SNORA40.12-201ENST00000516329 111 ntBASIC3.01□□□□□ -1.93
RTN3O95197 RNU1-107P-201ENST00000516617 154 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AP004607.1-201ENST00000524456 203 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.01□□□□□ -1.93
RTN3O95197 AC103810.1-201ENST00000579873 453 ntBASIC3.01□□□□□ -1.93
RTN3O95197 LRRC37A5P-203ENST00000580181 585 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.01□□□□□ -1.93
RTN3O95197 AL354950.2-201ENST00000617939 290 ntBASIC3.01□□□□□ -1.93
RTN3O95197 AL359880.1-201ENST00000621879 266 ntBASIC3.01□□□□□ -1.93
RTN3O95197 SCARNA4-202ENST00000625402 129 ntBASIC3.01□□□□□ -1.93
RTN3O95197 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.01□□□□□ -1.93
RTN3O95197 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTN3O95197 AC010329.5-201ENST00000623497 2174 ntBASIC3.01□□□□□ -1.93
RTN3O95197 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTN3O95197 AC006020.1-201ENST00000420179 1854 ntBASIC3.01□□□□□ -1.93
RTN3O95197 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3□□□□□ -1.93
RTN3O95197 MTND5P30-201ENST00000452896 1731 ntBASIC3□□□□□ -1.93
RTN3O95197 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
RTN3O95197 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
RTN3O95197 RNU6-1322P-201ENST00000364309 107 ntBASIC3□□□□□ -1.93
RTN3O95197 RNU6-607P-201ENST00000411283 108 ntBASIC3□□□□□ -1.93
RTN3O95197 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 AL096701.2-201ENST00000416920 238 ntBASIC3□□□□□ -1.93
RTN3O95197 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3□□□□□ -1.93
RTN3O95197 MTCYBP8-201ENST00000422855 651 ntBASIC3□□□□□ -1.93
RTN3O95197 AL606489.2-201ENST00000433886 234 ntBASIC3□□□□□ -1.93
RTN3O95197 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 AC105272.1-201ENST00000438604 198 ntBASIC3□□□□□ -1.93
RTN3O95197 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3□□□□□ -1.93
RTN3O95197 AC074344.1-201ENST00000512823 224 ntBASIC3□□□□□ -1.93
RTN3O95197 AC091826.1-201ENST00000514065 313 ntBASIC3□□□□□ -1.93
RTN3O95197 Y_RNA.655-201ENST00000515919 96 ntBASIC3□□□□□ -1.93
RTN3O95197 SNORA31.6-201ENST00000516241 130 ntBASIC3□□□□□ -1.93
RTN3O95197 IGHVII-62-1-201ENST00000519283 235 ntBASIC3□□□□□ -1.93
RTN3O95197 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3□□□□□ -1.93
RTN3O95197 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3□□□□□ -1.93
RTN3O95197 AL137161.1-201ENST00000532231 390 ntBASIC3□□□□□ -1.93
RTN3O95197 HIF1AP1-201ENST00000553642 175 ntBASIC3□□□□□ -1.93
RTN3O95197 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 AC025678.1-201ENST00000567861 338 ntBASIC3□□□□□ -1.93
RTN3O95197 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3□□□□□ -1.93
RTN3O95197 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3□□□□□ -1.93
RTN3O95197 AC068137.4-201ENST00000638485 296 ntBASIC3□□□□□ -1.93
RTN3O95197 AC099654.12-201ENST00000639868 649 ntBASIC3□□□□□ -1.93
RTN3O95197 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
RTN3O95197 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RTN3O95197 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RTN3O95197 RNU6-1085P-201ENST00000363576 107 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RNU6-461P-201ENST00000364195 107 ntBASIC2.99□□□□□ -1.93
RTN3O95197 Y_RNA.255-201ENST00000364581 97 ntBASIC2.99□□□□□ -1.93
RTN3O95197 Y_RNA.381-201ENST00000365666 102 ntBASIC2.99□□□□□ -1.93
RTN3O95197 Y_RNA.409-201ENST00000383990 98 ntBASIC2.99□□□□□ -1.93
RTN3O95197 SNORA18.3-201ENST00000384122 132 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RNU6-434P-201ENST00000384376 107 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RNU6-393P-201ENST00000384475 107 ntBASIC2.99□□□□□ -1.93
RTN3O95197 RNU6-1127P-201ENST00000384580 107 ntBASIC2.99□□□□□ -1.93
RTN3O95197 CIR1P3-201ENST00000405137 479 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms