Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-486P-201ENST00000363116 107 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RNA5SP126-201ENST00000365092 109 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 MIR518D-201ENST00000385014 87 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SEMA3DO95025 U6atac.2-201ENST00000408644 118 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RNU6-1025P-201ENST00000410629 104 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 SNORD56-201ENST00000413522 71 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AC011233.1-201ENST00000422812 283 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RPS3AP44-201ENST00000425466 790 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.78□□□□□ -2.12
SEMA3DO95025 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AL365184.2-201ENST00000431139 435 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RPS15AP9-201ENST00000439856 381 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 snoU109.1-201ENST00000459339 135 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RPL36AP48-201ENST00000485521 314 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RPS3AP22-201ENST00000488297 769 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC007182.2-201ENST00000489251 402 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC023194.1-201ENST00000493084 308 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RPS29P21-201ENST00000496272 170 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC109927.2-201ENST00000506416 303 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.78□□□□□ -2.12
SEMA3DO95025 RNA5SP112-201ENST00000515937 99 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 Y_RNA.689-201ENST00000516589 107 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RNU6-678P-201ENST00000516832 109 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RNU6-677P-201ENST00000516914 101 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 RNU6-1315P-201ENST00000517187 99 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AP003181.2-201ENST00000528941 181 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.78□□□□□ -2.12
SEMA3DO95025 AC007375.1-201ENST00000554513 578 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC012213.3-201ENST00000577199 777 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SEMA3DO95025 AC008751.2-201ENST00000597885 980 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 MIR15A-201ENST00000607334 83 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AP000240.1-201ENST00000609910 452 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 FRG1KP-201ENST00000623592 341 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 AC068787.1-201ENST00000623908 691 ntBASIC1.78□□□□□ -2.12
SEMA3DO95025 Z75746.1-201ENST00000440243 2080 ntBASIC1.78□□□□□ -2.13
SEMA3DO95025 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SEMA3DO95025 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SEMA3DO95025 RNU6-501P-201ENST00000364072 100 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 MIR301A-201ENST00000385261 86 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 RNU2-20P-201ENST00000410425 191 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.77□□□□□ -2.13
SEMA3DO95025 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.77□□□□□ -2.13
SEMA3DO95025 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.77□□□□□ -2.13
SEMA3DO95025 RPL23AP6-201ENST00000446637 472 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AL590365.1-201ENST00000450788 243 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 MTND2P14-201ENST00000482139 351 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC112204.1-201ENST00000502591 103 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.77□□□□□ -2.13
SEMA3DO95025 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.77□□□□□ -2.13
SEMA3DO95025 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 RNU2-10P-201ENST00000516375 211 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.77□□□□□ -2.13
SEMA3DO95025 AP001372.4-201ENST00000524889 472 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.77□□□□□ -2.13
SEMA3DO95025 AC025678.1-201ENST00000567861 338 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC012435.1-202ENST00000568772 240 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 MIR3126-201ENST00000577443 74 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
SEMA3DO95025 MIR4298-201ENST00000584380 73 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.77□□□□□ -2.13
SEMA3DO95025 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC087241.4-201ENST00000612441 480 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC024581.2-201ENST00000619986 252 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 ZNF702P-202ENST00000434269 1966 ntBASIC1.77□□□□□ -2.13
SEMA3DO95025 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.77□□□□□ -2.13
SEMA3DO95025 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
SEMA3DO95025 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SEMA3DO95025 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SEMA3DO95025 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 RNU6-960P-201ENST00000364056 120 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 SNORA75B-201ENST00000384053 137 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 RNU6-166P-201ENST00000384371 107 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 RNU6-748P-201ENST00000384648 107 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 SNORA40C-201ENST00000391285 128 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 RNU4-26P-201ENST00000410270 107 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 RN7SKP284-201ENST00000411002 343 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC097463.2-201ENST00000421074 142 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC006366.1-201ENST00000422002 759 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AL593851.1-201ENST00000426171 157 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AL591704.1-201ENST00000432574 275 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 MTCYBP39-201ENST00000437562 491 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AL008629.1-201ENST00000438615 184 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AL512286.1-201ENST00000439244 400 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AL078601.1-201ENST00000444542 271 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.76□□□□□ -2.13
SEMA3DO95025 FABP5P13-201ENST00000452144 328 ntBASIC1.76□□□□□ -2.13
SEMA3DO95025 BTF3P15-201ENST00000455606 336 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms