Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC024220.1-201ENST00000603675 484 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AL512643.1-201ENST00000635735 524 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
VAMP4O75379 AP001148.1-201ENST00000624124 2359 ntBASIC4.34□□□□□ -1.72
VAMP4O75379 AC007256.1-201ENST00000392253 2765 ntBASIC4.34□□□□□ -1.72
VAMP4O75379 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
VAMP4O75379 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VAMP4O75379 RNU6-512P-201ENST00000364438 103 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 RNU6-395P-201ENST00000365662 106 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 RNU6-1179P-201ENST00000384667 107 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VAMP4O75379 HMGB3P2-201ENST00000411913 584 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 RPS15AP6-201ENST00000420703 385 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.33□□□□□ -1.72
VAMP4O75379 AC005300.1-201ENST00000428401 373 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP4O75379 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP4O75379 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.33□□□□□ -1.72
VAMP4O75379 FTH1P25-201ENST00000447665 469 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 RPS4XP13-201ENST00000483219 789 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AC068781.1-201ENST00000488231 618 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AL049874.1-201ENST00000489560 388 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 SLC25A15P5-201ENST00000508033 253 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.33□□□□□ -1.72
VAMP4O75379 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.33□□□□□ -1.72
VAMP4O75379 ATP5F1P5-201ENST00000526403 760 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.33□□□□□ -1.72
VAMP4O75379 AL157871.3-201ENST00000557231 293 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.33□□□□□ -1.72
VAMP4O75379 AC008269.2-201ENST00000561915 1105 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AL161798.1-201ENST00000604630 131 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 AL160281.1-201ENST00000605307 311 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.33□□□□□ -1.72
VAMP4O75379 AC006023.2-201ENST00000609916 167 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 U6.98-201ENST00000637157 84 ntBASIC4.33□□□□□ -1.72
VAMP4O75379 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VAMP4O75379 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
VAMP4O75379 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VAMP4O75379 OR4G2P-202ENST00000641004 1759 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.32□□□□□ -1.72
VAMP4O75379 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP4O75379 AC116096.1-201ENST00000566804 2314 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 Y_RNA.149-201ENST00000363558 117 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 RNU6-1059P-201ENST00000363752 98 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 Y_RNA.527-201ENST00000384573 102 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 Y_RNA.557-201ENST00000384680 107 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 MIR7-3-201ENST00000384898 110 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 PTMAP5-201ENST00000393073 333 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 AL030996.1-201ENST00000411430 235 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VAMP4O75379 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP4O75379 AC091390.3-201ENST00000426478 338 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP4O75379 AC093151.1-201ENST00000427711 313 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 AC099799.1-201ENST00000439809 192 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP4O75379 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP4O75379 AC008571.1-201ENST00000467232 300 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 RPS20P22-201ENST00000473700 357 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 RNU6-475P-201ENST00000516073 104 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 MIR892C-201ENST00000516410 77 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.32□□□□□ -1.72
VAMP4O75379 TRAV37-201ENST00000553906 342 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 TGIF1P1-201ENST00000558095 802 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VAMP4O75379 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.32□□□□□ -1.72
VAMP4O75379 AC006557.5-201ENST00000603126 811 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.32□□□□□ -1.72
VAMP4O75379 AC005592.1-201ENST00000566527 1640 ntBASIC4.32□□□□□ -1.72
VAMP4O75379 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP4O75379 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.31□□□□□ -1.72
VAMP4O75379 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAMP4O75379 SNORA63.1-201ENST00000362493 131 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 Y_RNA.33-201ENST00000362591 102 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 Y_RNA.47-201ENST00000362697 108 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 Y_RNA.455-201ENST00000384230 98 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 RNVU1-14-201ENST00000384770 164 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 Y_RNA.645-201ENST00000391229 102 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 MIR1302-3-201ENST00000408128 138 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 RNU6-174P-201ENST00000410406 106 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.31□□□□□ -1.72
VAMP4O75379 NDUFB4P7-201ENST00000423198 363 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 HMGB1P12-201ENST00000438594 598 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 RPS23P3-201ENST00000470993 430 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 AL359273.1-201ENST00000510918 627 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.31□□□□□ -1.72
VAMP4O75379 RNU1-86P-201ENST00000516108 154 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 RNU1-107P-201ENST00000516617 154 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 Y_RNA.721-201ENST00000517207 102 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.31□□□□□ -1.72
VAMP4O75379 AC084851.1-201ENST00000529105 249 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 MED28P6-201ENST00000558776 231 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.31□□□□□ -1.72
VAMP4O75379 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.31□□□□□ -1.72
VAMP4O75379 AC104695.3-201ENST00000604052 296 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 PRR13P7-201ENST00000605538 430 ntBASIC4.31□□□□□ -1.72
VAMP4O75379 SNORD39.4-201ENST00000620099 78 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms