Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC010329.5-201ENST00000623497 2174 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AL356596.1-201ENST00000624230 379 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC079416.3-201ENST00000624479 549 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.83□□□□□ -2.12
NPHP4O75161 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
NPHP4O75161 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 RNU1-139P-201ENST00000391307 165 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.82□□□□□ -2.12
NPHP4O75161 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.82□□□□□ -2.12
NPHP4O75161 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.82□□□□□ -2.12
NPHP4O75161 AC013267.1-201ENST00000458227 267 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 AC112206.4-201ENST00000515142 405 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 RNU6-581P-201ENST00000516214 105 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 RNU6-64P-201ENST00000517119 105 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 CBX3P7-201ENST00000532876 502 ntBASIC1.82□□□□□ -2.12
NPHP4O75161 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.82□□□□□ -2.12
NPHP4O75161 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.82□□□□□ -2.12
NPHP4O75161 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NPHP4O75161 AC092125.1-201ENST00000562568 1995 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.81□□□□□ -2.12
NPHP4O75161 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NPHP4O75161 AL359634.1-202ENST00000404721 284 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC083875.1-201ENST00000419509 405 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.81□□□□□ -2.12
NPHP4O75161 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP4O75161 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.81□□□□□ -2.12
NPHP4O75161 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.81□□□□□ -2.12
NPHP4O75161 AC005094.1-201ENST00000440420 368 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP4O75161 HMGN2P10-201ENST00000448085 265 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP4O75161 MTATP6P14-201ENST00000455189 673 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP4O75161 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP4O75161 RN7SKP258-201ENST00000517151 304 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC006199.1-201ENST00000548728 219 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AL121821.2-201ENST00000556081 394 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.81□□□□□ -2.12
NPHP4O75161 MIR4765-201ENST00000585007 77 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.81□□□□□ -2.12
NPHP4O75161 AL157392.4-201ENST00000609756 345 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 DUSP12P1-201ENST00000612874 516 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AC025594.3-201ENST00000613068 790 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 AL049777.1-201ENST00000622740 518 ntBASIC1.81□□□□□ -2.12
NPHP4O75161 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NPHP4O75161 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NPHP4O75161 MTND5P10-201ENST00000603719 1809 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NPHP4O75161 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 FABP5P14-201ENST00000437273 393 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.8□□□□□ -2.12
NPHP4O75161 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.8□□□□□ -2.12
NPHP4O75161 AL161651.1-201ENST00000440882 223 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 OR6C5P-201ENST00000452388 923 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.8□□□□□ -2.12
NPHP4O75161 USP9YP25-201ENST00000457708 443 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 SNRPFP3-201ENST00000457792 225 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 ARL2BPP4-201ENST00000506854 471 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NPHP4O75161 RN7SKP265-201ENST00000516448 223 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AP005902.1-201ENST00000521358 186 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 DUXAP5-201ENST00000529668 529 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 NACAP3-201ENST00000552100 481 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.8□□□□□ -2.12
NPHP4O75161 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.8□□□□□ -2.12
NPHP4O75161 AC091152.3-201ENST00000604227 325 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AC004908.2-201ENST00000609090 574 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AC018645.2-201ENST00000609151 472 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AL161423.1-201ENST00000613700 262 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AC009090.3-201ENST00000616553 565 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.8□□□□□ -2.12
NPHP4O75161 AC025048.6-202ENST00000627667 438 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 AP000776.1-201ENST00000530032 1663 ntBASIC1.8□□□□□ -2.12
NPHP4O75161 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NPHP4O75161 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NPHP4O75161 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
NPHP4O75161 MIR122-201ENST00000385044 85 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 MIR625-201ENST00000385047 85 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 RPL26P27-201ENST00000414397 437 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.79□□□□□ -2.12
NPHP4O75161 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.79□□□□□ -2.12
NPHP4O75161 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.79□□□□□ -2.12
NPHP4O75161 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.79□□□□□ -2.12
NPHP4O75161 TXNL1P1-201ENST00000429528 554 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AC004383.1-201ENST00000438135 289 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 FABP5P15-201ENST00000453566 214 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 RNU7-59P-201ENST00000459101 61 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AP001324.2-201ENST00000461163 319 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 RPL7P18-201ENST00000478965 734 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 RPF2P2-201ENST00000504693 896 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.79□□□□□ -2.12
NPHP4O75161 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.79□□□□□ -2.12
NPHP4O75161 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.79□□□□□ -2.12
NPHP4O75161 ROCK1P1-201ENST00000573767 549 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.79□□□□□ -2.12
NPHP4O75161 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.79□□□□□ -2.12
NPHP4O75161 MIR4293-201ENST00000584305 78 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms